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#1 2019-04-23 21:10:03

jiv222
Member
Registered: 2019-01-14
Posts: 54

Broken Filesystem after booting into old suspend image

Hello all,

All has been going well for my Arch install up until yesterday.  When I try booting into my install, I am taken directly to my UEFI bios menu.  Normally, it would request to unlock my encrypted partition in order to recognize the lvm filesystem.  I chrooted in and had a look at journalctl, but was unable to find anything out of the ordinary.  The last log shows the system properly suspending then hibernating.

Here is my mkinitcpio.conf,

MODULES=(ext4)

# BINARIES
# This setting includes any additional binaries a given user may
# wish into the CPIO image.  This is run last, so it may be used to
# override the actual binaries included by a given hook
# BINARIES are dependency parsed, so you may safely ignore libraries
BINARIES=()

# FILES
# This setting is similar to BINARIES above, however, files are added
# as-is and are not parsed in any way.  This is useful for config files.
FILES=()

# HOOKS
# This is the most important setting in this file.  The HOOKS control the
# modules and scripts added to the image, and what happens at boot time.
# Order is important, and it is recommended that you do not change the
# order in which HOOKS are added.  Run 'mkinitcpio -H <hook name>' for
# help on a given hook.
# 'base' is _required_ unless you know precisely what you are doing.
# 'udev' is _required_ in order to automatically load modules
# 'filesystems' is _required_ unless you specify your fs modules in MODULES
# Examples:
##   This setup specifies all modules in the MODULES setting above.
##   No raid, lvm2, or encrypted root is needed.
#    HOOKS=(base)
#
##   This setup will autodetect all modules for your system and should
##   work as a sane default
#    HOOKS=(base udev autodetect block filesystems)
#
##   This setup will generate a 'full' image which supports most systems.
##   No autodetection is done.
#    HOOKS=(base udev block filesystems)
#
##   This setup assembles a pata mdadm array with an encrypted root FS.
##   Note: See 'mkinitcpio -H mdadm' for more information on raid devices.
#    HOOKS=(base udev block mdadm encrypt filesystems)
#
##   This setup loads an lvm2 volume group on a usb device.
#    HOOKS=(base udev block lvm2 filesystems)
#
##   NOTE: If you have /usr on a separate partition, you MUST include the
#    usr, fsck and shutdown hooks.
HOOKS=(base udev encrypt lvm2 resume modconf block filesystems keyboard fsck)

I also tried updating systemd-boot, using bootctl update, as well as running a 

 pacman -Syu linux-lts linux-lts-headers

Also, /boot/loader/entries/arch.conf:

title Arch Linux
linux /vmlinuz-linux-lts
initrd /intel-ucode.img
initrd /initramfs-linux-lts.img
options cryptdevice=UUID=<MyUUID>:MyVol root=/dev/mapper/MyVol-root quiet splash rw resume=/dev/mapper/MyVol-swap mem_sleep_default=deep pcie_port_pm=on nvidia-drm.modeset=1 rcutree.rcu_idle_gp_delay=1

Any direction on where/how I can better debug this would be great.  I've done as much as I've learned how to thus far, but am a bit lost atm.

Edit: Reopening due to broken filesystem. When I thought I had solved the problem above, I had really only booted into saved image that would be used to resume after suspension.  This was after chrooting from an Ubuntu live media.

Last edited by jiv222 (2019-04-24 04:58:34)

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#2 2019-04-23 21:48:35

loqs
Member
Registered: 2014-03-06
Posts: 17,309

Re: Broken Filesystem after booting into old suspend image

From the live media does efibootmgr list an entry for systemd-boot?

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#3 2019-04-23 21:56:33

jiv222
Member
Registered: 2019-01-14
Posts: 54

Re: Broken Filesystem after booting into old suspend image

Would this be found by using:  

efibootmgr

?
If so, the command efibootmgr isn't found in the live image.

Last edited by jiv222 (2019-04-23 21:58:21)

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#4 2019-04-23 22:07:50

loqs
Member
Registered: 2014-03-06
Posts: 17,309

Re: Broken Filesystem after booting into old suspend image

From the firmware there should an option to list/select boot device the name and location are customized by the motherboard / system manufacturer so I can not provide precise instructions.

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#5 2019-04-23 22:13:18

jiv222
Member
Registered: 2019-01-14
Posts: 54

Re: Broken Filesystem after booting into old suspend image

Oh okay I understand. Yes, when pressing F12 on my machine, I am given the options of 'Linux Boot Manager' and the usb.

Edit: When selecting 'Linux Boot Manager', the screen goes black for a few moments, then taken to the BIOS menu.

Last edited by jiv222 (2019-04-23 22:16:48)

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#6 2019-04-23 22:17:03

loqs
Member
Registered: 2014-03-06
Posts: 17,309

Re: Broken Filesystem after booting into old suspend image

If you select 'Linux Boot Manager' is systemd-boot loaded?
Edit:
From the live media mount the ESP and please post a listing of the contents also what was the output from bootctl?

Last edited by loqs (2019-04-23 22:20:38)

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#7 2019-04-23 22:57:52

jiv222
Member
Registered: 2019-01-14
Posts: 54

Re: Broken Filesystem after booting into old suspend image

Output of bootctl update:

Copied "/usr/lib/systemd/boot/efi/systemd-bootx64.efi" to "/boot/EFI/systemd/systemd-bootx64.efi".
Copied "/usr/lib/systemd/boot/efi/systemd-bootx64.efi" to "/boot/EFI/BOOT/BOOTX64.EFI".

ls -l /boot

total 147180
drwxr-xr-x 5 root root     4096 Mar 31 12:53 EFI
-rwxr-xr-x 1 root root 38829580 Apr 22 20:09 initramfs-linux-fallback.img
-rwxr-xr-x 1 root root 39302007 Apr 23 12:28 initramfs-linux-lts-fallback.img
-rwxr-xr-x 1 root root 39303726 Apr 23 12:28 initramfs-linux-lts.img
-rwxr-xr-x 1 root root 19274659 Apr 22 20:08 initramfs-linux.img
-rwxr-xr-x 1 root root  2219520 Mar 26 07:11 intel-ucode.img
drwxr-xr-x 3 root root     4096 Feb  7 02:45 loader
-rwxr-xr-x 1 root root  5941120 Apr 20 10:57 vmlinuz-linux
-rwxr-xr-x 1 root root  5822336 Apr 22 05:51 vmlinuz-linux-lts

Edit: changed 'ls /boot' to 'ls -l /boot'

Last edited by jiv222 (2019-04-24 02:55:31)

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#8 2019-04-24 03:03:34

jiv222
Member
Registered: 2019-01-14
Posts: 54

Re: Broken Filesystem after booting into old suspend image

Okay, so after a bit more messing around, I decided to try rebooting and it actually worked! I'm still not sure what the issue was, however. 

I am hoping it was the pacman -Syu linux-lts and lts-headers, since I didn't do anything else but update systemd-boot.  I may have done this incorrectly initially, since I forgot to copy over my efivars before chrooting.

Thanks for the help, loqs.

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#9 2019-04-24 05:05:08

jiv222
Member
Registered: 2019-01-14
Posts: 54

Re: Broken Filesystem after booting into old suspend image

I added an edit note to the OP.  Basically, I'm even further lost now.  After running the following commands on from the Ubuntu media while chrooted,

sudo pacman -Syu linux-lts linux-lts-headers
bootctl update
mkinitcpio -p linux-lts

dmesg shows:

[   16.094769] ------------[ cut here ]------------
[   16.094770] nouveau 0000:01:00.0: timeout
[   16.094817] WARNING: CPU: 10 PID: 1543 at /build/linux-hwe-9KJ07q/linux-hwe-4.18.0/drivers/gpu/drm/nouveau/nvkm/subdev/secboot/ls_ucode_msgqueue.c:183 acr_ls_sec2_post_run+0x1fc/0x270 [nouveau]
[   16.094817] Modules linked in: arc4 cmac hid_multitouch bnep hid_generic intel_rapl snd_hda_codec_hdmi x86_pkg_temp_thermal intel_powerclamp coretemp ath10k_pci kvm_intel ath10k_core snd_hda_codec_realtek snd_hda_codec_generic kvm ath mac80211 irqbypass crct10dif_pclmul crc32_pclmul snd_hda_intel ghash_clmulni_intel snd_hda_codec pcbc btusb btrtl snd_hda_core btbcm snd_hwdep btintel aesni_intel bluetooth cfg80211 snd_pcm aes_x86_64 crypto_simd cryptd dell_laptop cdc_acm dell_wmi snd_seq_midi snd_seq_midi_event glue_helper dell_smbios idma64 dcdbas snd_rawmidi virt_dma ecdh_generic intel_cstate snd_seq joydev input_leds intel_rapl_perf intel_lpss_pci dell_wmi_descriptor snd_seq_device rtsx_pci_ms mei_me serio_raw snd_timer wmi_bmof ucsi_acpi intel_wmi_thunderbolt memstick mei intel_lpss snd typec_ucsi
[   16.094839]  typec soundcore intel_hid processor_thermal_device int3403_thermal int3400_thermal intel_soc_dts_iosf intel_pch_thermal acpi_thermal_rel int340x_thermal_zone sparse_keymap mac_hid acpi_pad dell_smo8800 sch_fq_codel parport_pc ppdev lp parport ip_tables x_tables autofs4 overlay nls_utf8 isofs nls_iso8859_1 dm_mirror dm_region_hash dm_log uas usb_storage nouveau i915 rtsx_pci_sdmmc nvme ttm i2c_algo_bit drm_kms_helper syscopyarea mxm_wmi sysfillrect sysimgblt fb_sys_fops psmouse ahci drm nvme_core rtsx_pci libahci i2c_hid hid pinctrl_cannonlake wmi video pinctrl_intel
[   16.094858] CPU: 10 PID: 1543 Comm: Xorg Not tainted 4.18.0-15-generic #16~18.04.1-Ubuntu
[   16.094859] Hardware name: Dell Inc. XPS 15 9570/02MJVY, BIOS 1.5.0 09/03/2018
[   16.094877] RIP: 0010:acr_ls_sec2_post_run+0x1fc/0x270 [nouveau]
[   16.094878] Code: c2 e9 69 fe ff ff 49 8b 7f 10 48 8b 5f 50 48 85 db 74 74 e8 f6 6f c1 c2 48 89 da 48 89 c6 48 c7 c7 bf 2d 97 c0 e8 74 20 62 c2 <0f> 0b e9 ba fe ff ff 48 8b 45 c8 48 8b 78 10 48 8b 5f 50 48 85 db 
[   16.094894] RSP: 0018:ffffb5250215ba10 EFLAGS: 00010286
[   16.094895] RAX: 0000000000000000 RBX: ffff99a468cea4d0 RCX: 0000000000000006
[   16.094895] RDX: 0000000000000007 RSI: 0000000000000082 RDI: ffff99a46be964b0
[   16.094896] RBP: ffffb5250215ba50 R08: 000000000000041a R09: 0000000000000004
[   16.094897] R10: 0000000000000000 R11: 0000000000000001 R12: ffff99a4691aac80
[   16.094897] R13: 0000000000000040 R14: 0000000000000000 R15: ffff99a462987c00
[   16.094898] FS:  00007f08b3432a80(0000) GS:ffff99a46be80000(0000) knlGS:0000000000000000
[   16.094899] CS:  0010 DS: 0000 ES: 0000 CR0: 0000000080050033
[   16.094899] CR2: 00007f08a37111f0 CR3: 0000000462826001 CR4: 00000000003606e0
[   16.094900] Call Trace:
[   16.094917]  acr_r352_bootstrap+0x247/0x280 [nouveau]
[   16.094932]  acr_r352_reset+0x39/0x240 [nouveau]
[   16.094946]  nvkm_secboot_reset+0x35/0x70 [nouveau]
[   16.094965]  gf100_gr_init_ctxctl_ext+0x65/0x7a0 [nouveau]
[   16.094982]  gf100_gr_init_ctxctl+0x222/0x2c0 [nouveau]
[   16.094998]  gf100_gr_init+0x563/0x590 [nouveau]
[   16.095013]  gf100_gr_init_+0x5b/0x60 [nouveau]
[   16.095029]  nvkm_gr_init+0x1d/0x20 [nouveau]
[   16.095038]  nvkm_engine_init+0x6b/0x200 [nouveau]
[   16.095048]  nvkm_subdev_init+0xb9/0x200 [nouveau]
[   16.095056]  nvkm_engine_ref.part.0+0x4a/0x70 [nouveau]
[   16.095064]  nvkm_engine_ref+0x13/0x20 [nouveau]
[   16.095073]  nvkm_ioctl_new+0x27b/0x2c0 [nouveau]
[   16.095090]  ? nvkm_fifo_chan_dtor+0xf0/0xf0 [nouveau]
[   16.095106]  ? gf100_gr_chsw_load+0x50/0x50 [nouveau]
[   16.095115]  nvkm_ioctl+0x11d/0x280 [nouveau]
[   16.095132]  nvkm_client_ioctl+0x12/0x20 [nouveau]
[   16.095140]  nvif_client_ioctl+0x2c/0x30 [nouveau]
[   16.095156]  usif_ioctl+0x629/0x730 [nouveau]
[   16.095171]  nouveau_drm_ioctl+0xaf/0xc0 [nouveau]
[   16.095173]  do_vfs_ioctl+0xa8/0x630
[   16.095175]  ? handle_mm_fault+0xe3/0x220
[   16.095176]  ksys_ioctl+0x75/0x80
[   16.095177]  __x64_sys_ioctl+0x1a/0x20
[   16.095179]  do_syscall_64+0x5a/0x120
[   16.095181]  entry_SYSCALL_64_after_hwframe+0x44/0xa9
[   16.095182] RIP: 0033:0x7f08b06105d7
[   16.095182] Code: b3 66 90 48 8b 05 b1 48 2d 00 64 c7 00 26 00 00 00 48 c7 c0 ff ff ff ff c3 66 2e 0f 1f 84 00 00 00 00 00 b8 10 00 00 00 0f 05 <48> 3d 01 f0 ff ff 73 01 c3 48 8b 0d 81 48 2d 00 f7 d8 64 89 01 48 
[   16.095199] RSP: 002b:00007ffc81b47ae8 EFLAGS: 00000246 ORIG_RAX: 0000000000000010
[   16.095200] RAX: ffffffffffffffda RBX: 0000000000000038 RCX: 00007f08b06105d7
[   16.095200] RDX: 0000559c139ae710 RSI: 00000000c0386447 RDI: 0000000000000010
[   16.095201] RBP: 0000559c139ae710 R08: 0000559c139af970 R09: 0000559c139af610
[   16.095201] R10: 0000559c139afac0 R11: 0000000000000246 R12: 00000000c0386447
[   16.095202] R13: 0000000000000010 R14: 0000559c139ae748 R15: 0000000000000000
[   16.095203] ---[ end trace 929d8041c5de012d ]---
[   16.097502] IPv6: ADDRCONF(NETDEV_UP): wlp59s0: link is not ready
[   16.154434] IPv6: ADDRCONF(NETDEV_UP): wlp59s0: link is not ready
[   18.144043] nouveau 0000:01:00.0: secboot: error during falcon reset: -110
[   18.144047] nouveau 0000:01:00.0: gr: init failed, -110
[   20.131615] Bluetooth: RFCOMM TTY layer initialized
[   20.131620] Bluetooth: RFCOMM socket layer initialized
[   20.131623] Bluetooth: RFCOMM ver 1.11
[   21.139071] pciehp 0000:00:1b.0:pcie004: Slot(20): Link Up
[   21.244066] pci 0000:02:00.0: [8086:15da] type 01 class 0x060400
[   21.244159] pci 0000:02:00.0: enabling Extended Tags
[   21.244597] pci 0000:02:00.0: supports D1 D2
[   21.244599] pci 0000:02:00.0: PME# supported from D0 D1 D2 D3hot D3cold
[   21.244929] pci 0000:02:00.0: bridge configuration invalid ([bus 00-00]), reconfiguring
[   21.245132] pci 0000:03:00.0: [8086:15da] type 01 class 0x060400
[   21.245253] pci 0000:03:00.0: enabling Extended Tags
[   21.245412] pci 0000:03:00.0: supports D1 D2
[   21.245413] pci 0000:03:00.0: PME# supported from D0 D1 D2 D3hot D3cold
[   21.245581] pci 0000:03:01.0: [8086:15da] type 01 class 0x060400
[   21.245676] pci 0000:03:01.0: enabling Extended Tags
[   21.245960] pci 0000:03:01.0: supports D1 D2
[   21.245962] pci 0000:03:01.0: PME# supported from D0 D1 D2 D3hot D3cold
[   21.246147] pci 0000:03:02.0: [8086:15da] type 01 class 0x060400
[   21.246244] pci 0000:03:02.0: enabling Extended Tags
[   21.246389] pci 0000:03:02.0: supports D1 D2
[   21.246390] pci 0000:03:02.0: PME# supported from D0 D1 D2 D3hot D3cold
[   21.246610] pci 0000:02:00.0: PCI bridge to [bus 03-3a]
[   21.246622] pci 0000:02:00.0:   bridge window [io  0x0000-0x0fff]
[   21.246628] pci 0000:02:00.0:   bridge window [mem 0x00000000-0x000fffff]
[   21.246638] pci 0000:02:00.0:   bridge window [mem 0x00000000-0x000fffff 64bit pref]
[   21.246643] pci 0000:03:00.0: bridge configuration invalid ([bus 00-00]), reconfiguring
[   21.246656] pci 0000:03:01.0: bridge configuration invalid ([bus 00-00]), reconfiguring
[   21.246668] pci 0000:03:02.0: bridge configuration invalid ([bus 00-00]), reconfiguring
[   21.246795] pci 0000:04:00.0: [8086:15d9] type 00 class 0x088000
[   21.246842] pci 0000:04:00.0: reg 0x10: [mem 0x00000000-0x0003ffff]
[   21.246856] pci 0000:04:00.0: reg 0x14: [mem 0x00000000-0x00000fff]
[   21.246930] pci 0000:04:00.0: enabling Extended Tags
[   21.247082] pci 0000:04:00.0: supports D1 D2
[   21.247083] pci 0000:04:00.0: PME# supported from D0 D1 D2 D3hot D3cold
[   21.247341] pci 0000:03:00.0: PCI bridge to [bus 04-3a]
[   21.247351] pci 0000:03:00.0:   bridge window [io  0x0000-0x0fff]
[   21.247357] pci 0000:03:00.0:   bridge window [mem 0x00000000-0x000fffff]
[   21.247368] pci 0000:03:00.0:   bridge window [mem 0x00000000-0x000fffff 64bit pref]
[   21.247370] pci_bus 0000:04: busn_res: [bus 04-3a] end is updated to 04
[   21.247468] pci 0000:03:01.0: PCI bridge to [bus 05-3a]
[   21.247479] pci 0000:03:01.0:   bridge window [io  0x0000-0x0fff]
[   21.247485] pci 0000:03:01.0:   bridge window [mem 0x00000000-0x000fffff]
[   21.247495] pci 0000:03:01.0:   bridge window [mem 0x00000000-0x000fffff 64bit pref]
[   21.247497] pci_bus 0000:05: busn_res: [bus 05-3a] end is updated to 39
[   21.247620] pci 0000:3a:00.0: [8086:15db] type 00 class 0x0c0330
[   21.247669] pci 0000:3a:00.0: reg 0x10: [mem 0x00000000-0x0000ffff]
[   21.247758] pci 0000:3a:00.0: enabling Extended Tags
[   21.247944] pci 0000:3a:00.0: supports D1 D2
[   21.247945] pci 0000:3a:00.0: PME# supported from D0 D1 D2 D3hot D3cold
[   21.248201] pci 0000:03:02.0: PCI bridge to [bus 3a]
[   21.248212] pci 0000:03:02.0:   bridge window [io  0x0000-0x0fff]
[   21.248217] pci 0000:03:02.0:   bridge window [mem 0x00000000-0x000fffff]
[   21.248227] pci 0000:03:02.0:   bridge window [mem 0x00000000-0x000fffff 64bit pref]
[   21.248229] pci_bus 0000:3a: busn_res: [bus 3a] end is updated to 3a
[   21.248235] pci_bus 0000:03: busn_res: [bus 03-3a] end is updated to 3a
[   21.248269] pci 0000:03:01.0: bridge window [mem 0x00100000-0x001fffff 64bit pref] to [bus 05-39] add_size 200000 add_align 100000
[   21.248271] pci 0000:03:01.0: bridge window [mem 0x00100000-0x001fffff] to [bus 05-39] add_size 200000 add_align 100000
[   21.248301] pci 0000:02:00.0: bridge window [mem 0x00100000-0x003fffff 64bit pref] to [bus 03-3a] add_size 200000 add_align 100000
[   21.248303] pci 0000:02:00.0: bridge window [mem 0x00100000-0x003fffff] to [bus 03-3a] add_size 200000 add_align 100000
[   21.248321] pci 0000:02:00.0: BAR 14: assigned [mem 0xd4000000-0xea0fffff]
[   21.248322] pci 0000:02:00.0: BAR 15: assigned [mem 0x90000000-0xb1ffffff 64bit pref]
[   21.248324] pci 0000:02:00.0: BAR 13: no space for [io  size 0x3000]
[   21.248325] pci 0000:02:00.0: BAR 13: failed to assign [io  size 0x3000]
[   21.248326] pci 0000:02:00.0: BAR 13: no space for [io  size 0x3000]
[   21.248327] pci 0000:02:00.0: BAR 13: failed to assign [io  size 0x3000]
[   21.248330] pci 0000:03:00.0: BAR 14: assigned [mem 0xd4000000-0xd40fffff]
[   21.248331] pci 0000:03:00.0: BAR 15: assigned [mem 0x90000000-0x900fffff 64bit pref]
[   21.248332] pci 0000:03:01.0: BAR 14: assigned [mem 0xd4100000-0xe9ffffff]
[   21.248333] pci 0000:03:01.0: BAR 15: assigned [mem 0x90100000-0xb1efffff 64bit pref]
[   21.248335] pci 0000:03:02.0: BAR 14: assigned [mem 0xea000000-0xea0fffff]
[   21.248336] pci 0000:03:02.0: BAR 15: assigned [mem 0xb1f00000-0xb1ffffff 64bit pref]
[   21.248337] pci 0000:03:00.0: BAR 13: no space for [io  size 0x1000]
[   21.248338] pci 0000:03:00.0: BAR 13: failed to assign [io  size 0x1000]
[   21.248339] pci 0000:03:01.0: BAR 13: no space for [io  size 0x1000]
[   21.248340] pci 0000:03:01.0: BAR 13: failed to assign [io  size 0x1000]
[   21.248341] pci 0000:03:02.0: BAR 13: no space for [io  size 0x1000]
[   21.248342] pci 0000:03:02.0: BAR 13: failed to assign [io  size 0x1000]
[   21.248343] pci 0000:03:00.0: BAR 13: no space for [io  size 0x1000]
[   21.248344] pci 0000:03:00.0: BAR 13: failed to assign [io  size 0x1000]
[   21.248345] pci 0000:03:01.0: BAR 13: no space for [io  size 0x1000]
[   21.248346] pci 0000:03:01.0: BAR 13: failed to assign [io  size 0x1000]
[   21.248347] pci 0000:03:02.0: BAR 13: no space for [io  size 0x1000]
[   21.248348] pci 0000:03:02.0: BAR 13: failed to assign [io  size 0x1000]
[   21.248350] pci 0000:04:00.0: BAR 0: assigned [mem 0xd4000000-0xd403ffff]
[   21.248356] pci 0000:04:00.0: BAR 1: assigned [mem 0xd4040000-0xd4040fff]
[   21.248362] pci 0000:03:00.0: PCI bridge to [bus 04]
[   21.248371] pci 0000:03:00.0:   bridge window [mem 0xd4000000-0xd40fffff]
[   21.248377] pci 0000:03:00.0:   bridge window [mem 0x90000000-0x900fffff 64bit pref]
[   21.248386] pci 0000:03:01.0: PCI bridge to [bus 05-39]
[   21.248394] pci 0000:03:01.0:   bridge window [mem 0xd4100000-0xe9ffffff]
[   21.248400] pci 0000:03:01.0:   bridge window [mem 0x90100000-0xb1efffff 64bit pref]
[   21.248410] pci 0000:3a:00.0: BAR 0: assigned [mem 0xea000000-0xea00ffff]
[   21.248417] pci 0000:03:02.0: PCI bridge to [bus 3a]
[   21.248425] pci 0000:03:02.0:   bridge window [mem 0xea000000-0xea0fffff]
[   21.248430] pci 0000:03:02.0:   bridge window [mem 0xb1f00000-0xb1ffffff 64bit pref]
[   21.248440] pci 0000:02:00.0: PCI bridge to [bus 03-3a]
[   21.248447] pci 0000:02:00.0:   bridge window [mem 0xd4000000-0xea0fffff]
[   21.248452] pci 0000:02:00.0:   bridge window [mem 0x90000000-0xb1ffffff 64bit pref]
[   21.248462] pcieport 0000:00:1b.0: PCI bridge to [bus 02-3a]
[   21.248465] pcieport 0000:00:1b.0:   bridge window [io  0x5000-0x5fff]
[   21.248473] pcieport 0000:00:1b.0:   bridge window [mem 0xd4000000-0xea0fffff]
[   21.248478] pcieport 0000:00:1b.0:   bridge window [mem 0x90000000-0xb1ffffff 64bit pref]
[   21.248488] PCI: No. 2 try to assign unassigned res
[   21.248491] pcieport 0000:00:1b.0: resource 13 [io  0x5000-0x5fff] released
[   21.248492] pcieport 0000:00:1b.0: PCI bridge to [bus 02-3a]
[   21.248570] pcieport 0000:00:1b.0: bridge window [io  0x1000-0x3fff] to [bus 02-3a] add_size 1000
[   21.248574] pcieport 0000:00:1b.0: BAR 13: assigned [io  0x5000-0x8fff]
[   21.248575] pci 0000:02:00.0: BAR 13: assigned [io  0x5000-0x7fff]
[   21.248577] pci 0000:03:00.0: BAR 13: assigned [io  0x5000-0x5fff]
[   21.248578] pci 0000:03:01.0: BAR 13: assigned [io  0x6000-0x6fff]
[   21.248579] pci 0000:03:02.0: BAR 13: assigned [io  0x7000-0x7fff]
[   21.248580] pci 0000:03:00.0: PCI bridge to [bus 04]
[   21.248586] pci 0000:03:00.0:   bridge window [io  0x5000-0x5fff]
[   21.248593] pci 0000:03:00.0:   bridge window [mem 0xd4000000-0xd40fffff]
[   21.248599] pci 0000:03:00.0:   bridge window [mem 0x90000000-0x900fffff 64bit pref]
[   21.248608] pci 0000:03:01.0: PCI bridge to [bus 05-39]
[   21.248611] pci 0000:03:01.0:   bridge window [io  0x6000-0x6fff]
[   21.248619] pci 0000:03:01.0:   bridge window [mem 0xd4100000-0xe9ffffff]
[   21.248624] pci 0000:03:01.0:   bridge window [mem 0x90100000-0xb1efffff 64bit pref]
[   21.248634] pci 0000:03:02.0: PCI bridge to [bus 3a]
[   21.248637] pci 0000:03:02.0:   bridge window [io  0x7000-0x7fff]
[   21.248645] pci 0000:03:02.0:   bridge window [mem 0xea000000-0xea0fffff]
[   21.248651] pci 0000:03:02.0:   bridge window [mem 0xb1f00000-0xb1ffffff 64bit pref]
[   21.248662] pci 0000:02:00.0: PCI bridge to [bus 03-3a]
[   21.248664] pci 0000:02:00.0:   bridge window [io  0x5000-0x7fff]
[   21.248672] pci 0000:02:00.0:   bridge window [mem 0xd4000000-0xea0fffff]
[   21.248677] pci 0000:02:00.0:   bridge window [mem 0x90000000-0xb1ffffff 64bit pref]
[   21.248687] pcieport 0000:00:1b.0: PCI bridge to [bus 02-3a]
[   21.248690] pcieport 0000:00:1b.0:   bridge window [io  0x5000-0x8fff]
[   21.248697] pcieport 0000:00:1b.0:   bridge window [mem 0xd4000000-0xea0fffff]
[   21.248702] pcieport 0000:00:1b.0:   bridge window [mem 0x90000000-0xb1ffffff 64bit pref]
[   21.248749] pcieport 0000:02:00.0: enabling device (0000 -> 0003)
[   21.248991] pcieport 0000:03:00.0: enabling device (0000 -> 0003)
[   21.249197] pcieport 0000:03:01.0: enabling device (0000 -> 0003)
[   21.249383] pciehp 0000:03:01.0:pcie204: Slot #1 AttnBtn- PwrCtrl- MRL- AttnInd- PwrInd- HotPlug+ Surprise+ Interlock- NoCompl+ LLActRep+
[   21.249824] pcieport 0000:03:02.0: enabling device (0000 -> 0003)
[   21.250102] pci 0000:3a:00.0: enabling device (0000 -> 0002)
[   21.250389] xhci_hcd 0000:3a:00.0: xHCI Host Controller
[   21.250393] xhci_hcd 0000:3a:00.0: new USB bus registered, assigned bus number 3
[   21.251662] xhci_hcd 0000:3a:00.0: hcc params 0x200077c1 hci version 0x110 quirks 0x0000000000009810
[   21.251958] usb usb3: New USB device found, idVendor=1d6b, idProduct=0002, bcdDevice= 4.18
[   21.251959] usb usb3: New USB device strings: Mfr=3, Product=2, SerialNumber=1
[   21.251961] usb usb3: Product: xHCI Host Controller
[   21.251962] usb usb3: Manufacturer: Linux 4.18.0-15-generic xhci-hcd
[   21.251963] usb usb3: SerialNumber: 0000:3a:00.0
[   21.252127] hub 3-0:1.0: USB hub found
[   21.252141] hub 3-0:1.0: 2 ports detected
[   21.252354] xhci_hcd 0000:3a:00.0: xHCI Host Controller
[   21.252358] xhci_hcd 0000:3a:00.0: new USB bus registered, assigned bus number 4
[   21.252360] xhci_hcd 0000:3a:00.0: Host supports USB 3.1 Enhanced SuperSpeed
[   21.252399] usb usb4: New USB device found, idVendor=1d6b, idProduct=0003, bcdDevice= 4.18
[   21.252401] usb usb4: New USB device strings: Mfr=3, Product=2, SerialNumber=1
[   21.252402] usb usb4: Product: xHCI Host Controller
[   21.252403] usb usb4: Manufacturer: Linux 4.18.0-15-generic xhci-hcd
[   21.252404] usb usb4: SerialNumber: 0000:3a:00.0
[   21.252529] hub 4-0:1.0: USB hub found
[   21.252542] hub 4-0:1.0: 2 ports detected
[   21.329789] thunderbolt 0000:04:00.0: enabling device (0000 -> 0002)
[   21.330204] thunderbolt 0000:04:00.0: NHI initialized, starting thunderbolt
[   21.330207] thunderbolt 0000:04:00.0: allocating TX ring 0 of size 10
[   21.330223] thunderbolt 0000:04:00.0: allocating RX ring 0 of size 10
[   21.330236] thunderbolt 0000:04:00.0: control channel created
[   21.330237] thunderbolt 0000:04:00.0: control channel starting...
[   21.330238] thunderbolt 0000:04:00.0: starting TX ring 0
[   21.330245] thunderbolt 0000:04:00.0: enabling interrupt at register 0x38200 bit 0 (0x0 -> 0x1)
[   21.330246] thunderbolt 0000:04:00.0: starting RX ring 0
[   21.330254] thunderbolt 0000:04:00.0: enabling interrupt at register 0x38200 bit 12 (0x1 -> 0x1001)
[   21.342940] rfkill: input handler disabled
[   21.427921] CPU0: Core temperature above threshold, cpu clock throttled (total events = 1)
[   21.427922] CPU6: Core temperature above threshold, cpu clock throttled (total events = 1)
[   21.427923] CPU4: Package temperature above threshold, cpu clock throttled (total events = 1)
[   21.427924] CPU1: Core temperature above threshold, cpu clock throttled (total events = 1)
[   21.427925] CPU10: Package temperature above threshold, cpu clock throttled (total events = 1)
[   21.427926] CPU2: Package temperature above threshold, cpu clock throttled (total events = 1)
[   21.427927] CPU7: Core temperature above threshold, cpu clock throttled (total events = 1)
[   21.427928] CPU8: Package temperature above threshold, cpu clock throttled (total events = 1)
[   21.427929] CPU3: Package temperature above threshold, cpu clock throttled (total events = 1)
[   21.427930] CPU5: Package temperature above threshold, cpu clock throttled (total events = 1)
[   21.427931] CPU11: Package temperature above threshold, cpu clock throttled (total events = 1)
[   21.427932] CPU9: Package temperature above threshold, cpu clock throttled (total events = 1)
[   21.427934] CPU6: Package temperature above threshold, cpu clock throttled (total events = 1)
[   21.427935] CPU1: Package temperature above threshold, cpu clock throttled (total events = 1)
[   21.427935] CPU7: Package temperature above threshold, cpu clock throttled (total events = 1)
[   21.427945] CPU0: Package temperature above threshold, cpu clock throttled (total events = 1)
[   21.428894] CPU0: Core temperature/speed normal
[   21.428894] CPU6: Core temperature/speed normal
[   22.022071] thunderbolt 0000:04:00.0: current switch config:
[   22.022073] thunderbolt 0000:04:00.0:  Switch: 8086:15da (Revision: 6, TB Version: 2)
[   22.022074] thunderbolt 0000:04:00.0:   Max Port Number: 11
[   22.022074] thunderbolt 0000:04:00.0:   Config:
[   22.022075] thunderbolt 0000:04:00.0:    Upstream Port Number: 5 Depth: 0 Route String: 0x0 Enabled: 1, PlugEventsDelay: 254ms
[   22.022076] thunderbolt 0000:04:00.0:    unknown1: 0x0 unknown4: 0x0
[   22.069918] thunderbolt 0000:04:00.0: 0: uid: 0xd4e3386461b800
[   22.071345] thunderbolt 0000:04:00.0:  Port 0: 8086:15da (Revision: 6, TB Version: 1, Type: Port (0x1))
[   22.071346] thunderbolt 0000:04:00.0:   Max hop id (in/out): 7/7
[   22.071347] thunderbolt 0000:04:00.0:   Max counters: 8
[   22.071348] thunderbolt 0000:04:00.0:   NFC Credits: 0x800000
[   22.071832] thunderbolt 0000:04:00.0:  Port 1: 8086:15da (Revision: 6, TB Version: 1, Type: Port (0x1))
[   22.071833] thunderbolt 0000:04:00.0:   Max hop id (in/out): 15/15
[   22.071834] thunderbolt 0000:04:00.0:   Max counters: 16
[   22.071835] thunderbolt 0000:04:00.0:   NFC Credits: 0x3c00000
[   22.072381] thunderbolt 0000:04:00.0:  Port 2: 8086:15da (Revision: 6, TB Version: 1, Type: Port (0x1))
[   22.072382] thunderbolt 0000:04:00.0:   Max hop id (in/out): 15/15
[   22.072402] thunderbolt 0000:04:00.0:   Max counters: 16
[   22.072403] thunderbolt 0000:04:00.0:   NFC Credits: 0x3c00000
[   22.072404] thunderbolt 0000:04:00.0: 0:3: disabled by eeprom
[   22.072404] thunderbolt 0000:04:00.0: 0:4: disabled by eeprom
[   22.072405] thunderbolt 0000:04:00.0: 0:5: disabled by eeprom
[   22.072472] thunderbolt 0000:04:00.0:  Port 6: 8086:15da (Revision: 6, TB Version: 1, Type: PCIe (0x100101))
[   22.072473] thunderbolt 0000:04:00.0:   Max hop id (in/out): 8/8
[   22.072474] thunderbolt 0000:04:00.0:   Max counters: 2
[   22.072474] thunderbolt 0000:04:00.0:   NFC Credits: 0x800000
[   22.072611] thunderbolt 0000:04:00.0:  Port 7: 8086:15da (Revision: 6, TB Version: 1, Type: PCIe (0x100101))
[   22.072612] thunderbolt 0000:04:00.0:   Max hop id (in/out): 8/8
[   22.072613] thunderbolt 0000:04:00.0:   Max counters: 2
[   22.072614] thunderbolt 0000:04:00.0:   NFC Credits: 0x800000
[   22.072764] thunderbolt 0000:04:00.0:  Port 8: 8086:15da (Revision: 6, TB Version: 1, Type: DP/HDMI (0xe0102))
[   22.072765] thunderbolt 0000:04:00.0:   Max hop id (in/out): 9/9
[   22.072766] thunderbolt 0000:04:00.0:   Max counters: 2
[   22.072767] thunderbolt 0000:04:00.0:   NFC Credits: 0x800000
[   22.072885] thunderbolt 0000:04:00.0:  Port 9: 8086:15da (Revision: 6, TB Version: 1, Type: DP/HDMI (0xe0101))
[   22.072886] thunderbolt 0000:04:00.0:   Max hop id (in/out): 9/9
[   22.072887] thunderbolt 0000:04:00.0:   Max counters: 2
[   22.072888] thunderbolt 0000:04:00.0:   NFC Credits: 0x1000000
[   22.072983] thunderbolt 0000:04:00.0:  Port 10: 8086:15da (Revision: 6, TB Version: 1, Type: DP/HDMI (0xe0101))
[   22.072984] thunderbolt 0000:04:00.0:   Max hop id (in/out): 9/9
[   22.072984] thunderbolt 0000:04:00.0:   Max counters: 2
[   22.072985] thunderbolt 0000:04:00.0:   NFC Credits: 0x1000000
[   22.072986] thunderbolt 0000:04:00.0: 0:b: disabled by eeprom
[   22.361289] audit: type=1400 audit(1556081046.748:4): apparmor="STATUS" operation="profile_load" profile="unconfined" name="/snap/core/6350/usr/lib/snapd/snap-confine" pid=2657 comm="apparmor_parser"
[   22.361344] audit: type=1400 audit(1556081046.748:5): apparmor="STATUS" operation="profile_load" profile="unconfined" name="/snap/core/6350/usr/lib/snapd/snap-confine//mount-namespace-capture-helper" pid=2657 comm="apparmor_parser"
[   22.370469] audit: type=1400 audit(1556081046.756:6): apparmor="STATUS" operation="profile_load" profile="unconfined" name="snap-update-ns.core" pid=2668 comm="apparmor_parser"
[   22.420411] audit: type=1400 audit(1556081046.808:7): apparmor="STATUS" operation="profile_load" profile="unconfined" name="snap.core.hook.configure" pid=2669 comm="apparmor_parser"
[   24.268705] pcieport 0000:00:1b.0: PCI bridge to [bus 02-3a]
[   24.268708] pcieport 0000:00:1b.0:   bridge window [io  0x5000-0x8fff]
[   24.268715] pcieport 0000:00:1b.0:   bridge window [mem 0xd4000000-0xea0fffff]
[   24.268721] pcieport 0000:00:1b.0:   bridge window [mem 0x90000000-0xb1ffffff 64bit pref]
[   37.497559] audit: type=1400 audit(1556081061.884:8): apparmor="STATUS" operation="profile_load" profile="unconfined" name="snap-update-ns.gnome-calculator" pid=3131 comm="apparmor_parser"
[   37.563528] audit: type=1400 audit(1556081061.948:9): apparmor="STATUS" operation="profile_load" profile="unconfined" name="snap.gnome-calculator.gnome-calculator" pid=3132 comm="apparmor_parser"
[   37.638188] audit: type=1400 audit(1556081062.024:10): apparmor="STATUS" operation="profile_replace" profile="unconfined" name="/snap/core/6350/usr/lib/snapd/snap-confine" pid=3143 comm="apparmor_parser"
[   37.660159] audit: type=1400 audit(1556081062.048:11): apparmor="STATUS" operation="profile_replace" profile="unconfined" name="/snap/core/6350/usr/lib/snapd/snap-confine//mount-namespace-capture-helper" pid=3143 comm="apparmor_parser"
[   37.662228] audit: type=1400 audit(1556081062.048:12): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="snap-update-ns.core" pid=3145 comm="apparmor_parser"
[   37.662905] audit: type=1400 audit(1556081062.048:13): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="snap.core.hook.configure" pid=3146 comm="apparmor_parser"
[   37.786097] audit: type=1400 audit(1556081062.172:14): apparmor="STATUS" operation="profile_replace" profile="unconfined" name="snap.gnome-calculator.gnome-calculator" pid=3154 comm="apparmor_parser"
[   37.788129] audit: type=1400 audit(1556081062.176:15): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="snap-update-ns.gnome-calculator" pid=3156 comm="apparmor_parser"
[   37.812767] audit: type=1400 audit(1556081062.200:16): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="/snap/core/6350/usr/lib/snapd/snap-confine" pid=3164 comm="apparmor_parser"
[   37.812769] audit: type=1400 audit(1556081062.200:17): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="/snap/core/6350/usr/lib/snapd/snap-confine//mount-namespace-capture-helper" pid=3164 comm="apparmor_parser"
[   39.258246] ACPI BIOS Error (bug): Could not resolve [\_SB.PCI0.PEG0.PEGP.BRT6.LCD], AE_NOT_FOUND (20180531/psargs-330)
[   39.258254] No Local Variables are initialized for Method [BRT6]
[   39.258255] Initialized Arguments for Method [BRT6]:  (2 arguments defined for method invocation)
[   39.258256]   Arg0:   0000000032025bed <Obj>           Integer 0000000000000002
[   39.258259]   Arg1:   000000004d6659f4 <Obj>           Integer 0000000000000000
[   39.258263] ACPI Error: Method parse/execution failed \_SB.PCI0.PEG0.PEGP.BRT6, AE_NOT_FOUND (20180531/psparse-516)
[   39.258306] ACPI Error: Method parse/execution failed \EV5, AE_NOT_FOUND (20180531/psparse-516)
[   39.258348] ACPI Error: Method parse/execution failed \SMEE, AE_NOT_FOUND (20180531/psparse-516)
[   39.258391] ACPI Error: Method parse/execution failed \SMIE, AE_NOT_FOUND (20180531/psparse-516)
[   39.258434] ACPI Error: Method parse/execution failed \NEVT, AE_NOT_FOUND (20180531/psparse-516)
[   39.258477] ACPI Error: Method parse/execution failed \_SB.PCI0.LPCB.ECDV._Q66, AE_NOT_FOUND (20180531/psparse-516)
[   39.407083] ACPI BIOS Error (bug): Could not resolve [\_SB.PCI0.PEG0.PEGP.BRT6.LCD], AE_NOT_FOUND (20180531/psargs-330)
[   39.407108] No Local Variables are initialized for Method [BRT6]
[   39.407109] Initialized Arguments for Method [BRT6]:  (2 arguments defined for method invocation)
[   39.407110]   Arg0:   000000004d6659f4 <Obj>           Integer 0000000000000002
[   39.407113]   Arg1:   0000000071da8dd4 <Obj>           Integer 0000000000000000
[   39.407117] ACPI Error: Method parse/execution failed \_SB.PCI0.PEG0.PEGP.BRT6, AE_NOT_FOUND (20180531/psparse-516)
[   39.407159] ACPI Error: Method parse/execution failed \EV5, AE_NOT_FOUND (20180531/psparse-516)
[   39.407202] ACPI Error: Method parse/execution failed \SMEE, AE_NOT_FOUND (20180531/psparse-516)
[   39.407244] ACPI Error: Method parse/execution failed \SMIE, AE_NOT_FOUND (20180531/psparse-516)
[   39.407287] ACPI Error: Method parse/execution failed \NEVT, AE_NOT_FOUND (20180531/psparse-516)
[   39.407331] ACPI Error: Method parse/execution failed \_SB.PCI0.LPCB.ECDV._Q66, AE_NOT_FOUND (20180531/psparse-516)
[   39.542462] ACPI BIOS Error (bug): Could not resolve [\_SB.PCI0.PEG0.PEGP.BRT6.LCD], AE_NOT_FOUND (20180531/psargs-330)
[   39.542470] No Local Variables are initialized for Method [BRT6]
[   39.542471] Initialized Arguments for Method [BRT6]:  (2 arguments defined for method invocation)
[   39.542472]   Arg0:   0000000025df07cb <Obj>           Integer 0000000000000002
[   39.542475]   Arg1:   000000006ebc3c2d <Obj>           Integer 0000000000000000
[   39.542478] ACPI Error: Method parse/execution failed \_SB.PCI0.PEG0.PEGP.BRT6, AE_NOT_FOUND (20180531/psparse-516)
[   39.542521] ACPI Error: Method parse/execution failed \EV5, AE_NOT_FOUND (20180531/psparse-516)
[   39.542564] ACPI Error: Method parse/execution failed \SMEE, AE_NOT_FOUND (20180531/psparse-516)
[   39.542607] ACPI Error: Method parse/execution failed \SMIE, AE_NOT_FOUND (20180531/psparse-516)
[   39.542650] ACPI Error: Method parse/execution failed \NEVT, AE_NOT_FOUND (20180531/psparse-516)
[   39.542693] ACPI Error: Method parse/execution failed \_SB.PCI0.LPCB.ECDV._Q66, AE_NOT_FOUND (20180531/psparse-516)
[   39.910341] ACPI BIOS Error (bug): Could not resolve [\_SB.PCI0.PEG0.PEGP.BRT6.LCD], AE_NOT_FOUND (20180531/psargs-330)
[   39.910349] No Local Variables are initialized for Method [BRT6]
[   39.910350] Initialized Arguments for Method [BRT6]:  (2 arguments defined for method invocation)
[   39.910350]   Arg0:   0000000025df07cb <Obj>           Integer 0000000000000002
[   39.910354]   Arg1:   000000006ebc3c2d <Obj>           Integer 0000000000000000
[   39.910357] ACPI Error: Method parse/execution failed \_SB.PCI0.PEG0.PEGP.BRT6, AE_NOT_FOUND (20180531/psparse-516)
[   39.910400] ACPI Error: Method parse/execution failed \EV5, AE_NOT_FOUND (20180531/psparse-516)
[   39.910443] ACPI Error: Method parse/execution failed \SMEE, AE_NOT_FOUND (20180531/psparse-516)
[   39.910599] ACPI Error: Method parse/execution failed \SMIE, AE_NOT_FOUND (20180531/psparse-516)
[   39.910643] ACPI Error: Method parse/execution failed \NEVT, AE_NOT_FOUND (20180531/psparse-516)
[   39.910689] ACPI Error: Method parse/execution failed \_SB.PCI0.LPCB.ECDV._Q66, AE_NOT_FOUND (20180531/psparse-516)
[   40.050733] ACPI BIOS Error (bug): Could not resolve [\_SB.PCI0.PEG0.PEGP.BRT6.LCD], AE_NOT_FOUND (20180531/psargs-330)
[   40.050741] No Local Variables are initialized for Method [BRT6]
[   40.050742] Initialized Arguments for Method [BRT6]:  (2 arguments defined for method invocation)
[   40.050743]   Arg0:   0000000083f3208d <Obj>           Integer 0000000000000002
[   40.050746]   Arg1:   00000000f076cef8 <Obj>           Integer 0000000000000000
[   40.050749] ACPI Error: Method parse/execution failed \_SB.PCI0.PEG0.PEGP.BRT6, AE_NOT_FOUND (20180531/psparse-516)
[   40.050792] ACPI Error: Method parse/execution failed \EV5, AE_NOT_FOUND (20180531/psparse-516)
[   40.050835] ACPI Error: Method parse/execution failed \SMEE, AE_NOT_FOUND (20180531/psparse-516)
[   40.050878] ACPI Error: Method parse/execution failed \SMIE, AE_NOT_FOUND (20180531/psparse-516)
[   40.050920] ACPI Error: Method parse/execution failed \NEVT, AE_NOT_FOUND (20180531/psparse-516)
[   40.050963] ACPI Error: Method parse/execution failed \_SB.PCI0.LPCB.ECDV._Q66, AE_NOT_FOUND (20180531/psparse-516)
[   40.194428] ACPI BIOS Error (bug): Could not resolve [\_SB.PCI0.PEG0.PEGP.BRT6.LCD], AE_NOT_FOUND (20180531/psargs-330)
[   40.194437] No Local Variables are initialized for Method [BRT6]
[   40.194438] Initialized Arguments for Method [BRT6]:  (2 arguments defined for method invocation)
[   40.194438]   Arg0:   0000000083f3208d <Obj>           Integer 0000000000000002
[   40.194441]   Arg1:   00000000f076cef8 <Obj>           Integer 0000000000000000
[   40.194445] ACPI Error: Method parse/execution failed \_SB.PCI0.PEG0.PEGP.BRT6, AE_NOT_FOUND (20180531/psparse-516)
[   40.194488] ACPI Error: Method parse/execution failed \EV5, AE_NOT_FOUND (20180531/psparse-516)
[   40.194531] ACPI Error: Method parse/execution failed \SMEE, AE_NOT_FOUND (20180531/psparse-516)
[   40.194574] ACPI Error: Method parse/execution failed \SMIE, AE_NOT_FOUND (20180531/psparse-516)
[   40.194616] ACPI Error: Method parse/execution failed \NEVT, AE_NOT_FOUND (20180531/psparse-516)
[   40.194659] ACPI Error: Method parse/execution failed \_SB.PCI0.LPCB.ECDV._Q66, AE_NOT_FOUND (20180531/psparse-516)
[   42.172185] pciehp 0000:00:1b.0:pcie004: Slot(20): Link Down
[   42.172209] xhci_hcd 0000:3a:00.0: remove, state 4
[   42.172214] usb usb4: USB disconnect, device number 1
[   42.172343] xhci_hcd 0000:3a:00.0: USB bus 4 deregistered
[   42.172357] xhci_hcd 0000:3a:00.0: xHCI host controller not responding, assume dead
[   42.172360] xhci_hcd 0000:3a:00.0: remove, state 4
[   42.172362] usb usb3: USB disconnect, device number 1
[   42.172463] xhci_hcd 0000:3a:00.0: Host halt failed, -19
[   42.172465] xhci_hcd 0000:3a:00.0: Host not accessible, reset failed.
[   42.172529] xhci_hcd 0000:3a:00.0: USB bus 3 deregistered
[   42.518726] kauditd_printk_skb: 40 callbacks suppressed
[   42.518727] audit: type=1400 audit(1556081066.904:58): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="/snap/core/6350/usr/lib/snapd/snap-confine" pid=3485 comm="apparmor_parser"
[   42.518728] audit: type=1400 audit(1556081066.904:59): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="/snap/core/6350/usr/lib/snapd/snap-confine//mount-namespace-capture-helper" pid=3485 comm="apparmor_parser"
[   42.520849] audit: type=1400 audit(1556081066.908:60): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="snap-update-ns.core" pid=3487 comm="apparmor_parser"
[   42.521470] audit: type=1400 audit(1556081066.908:61): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="snap.core.hook.configure" pid=3488 comm="apparmor_parser"
[   42.615636] audit: type=1400 audit(1556081067.000:62): apparmor="STATUS" operation="profile_replace" profile="unconfined" name="snap.gnome-characters.gnome-characters" pid=3496 comm="apparmor_parser"
[   42.618157] audit: type=1400 audit(1556081067.004:63): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="snap-update-ns.gnome-characters" pid=3498 comm="apparmor_parser"
[   42.673323] thunderbolt 0000:04:00.0: stopping RX ring 0
[   42.673335] thunderbolt 0000:04:00.0: disabling interrupt at register 0x38200 bit 12 (0xffffffff -> 0xffffefff)
[   42.673342] thunderbolt 0000:04:00.0: stopping TX ring 0
[   42.673349] thunderbolt 0000:04:00.0: disabling interrupt at register 0x38200 bit 0 (0xffffffff -> 0xfffffffe)
[   42.673351] thunderbolt 0000:04:00.0: control channel stopped
[   42.673400] thunderbolt 0000:04:00.0: freeing RX ring 0
[   42.673413] thunderbolt 0000:04:00.0: freeing TX ring 0
[   42.673419] thunderbolt 0000:04:00.0: shutdown
[   42.673732] pci_bus 0000:04: busn_res: [bus 04] is released
[   42.673761] pci_bus 0000:05: busn_res: [bus 05-39] is released
[   42.673810] pci_bus 0000:3a: busn_res: [bus 3a] is released
[   42.673834] pci_bus 0000:03: busn_res: [bus 03-3a] is released
[   42.724649] audit: type=1400 audit(1556081067.112:64): apparmor="STATUS" operation="profile_replace" profile="unconfined" name="snap.gnome-characters.gnome-characters" pid=3507 comm="apparmor_parser"
[   43.009397] audit: type=1400 audit(1556081067.396:65): apparmor="STATUS" operation="profile_replace" profile="unconfined" name="snap-update-ns.gnome-characters" pid=3506 comm="apparmor_parser"
[   43.037204] audit: type=1400 audit(1556081067.424:66): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="/snap/core/6350/usr/lib/snapd/snap-confine" pid=3522 comm="apparmor_parser"
[   43.037207] audit: type=1400 audit(1556081067.424:67): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="/snap/core/6350/usr/lib/snapd/snap-confine//mount-namespace-capture-helper" pid=3522 comm="apparmor_parser"
[   47.555571] kauditd_printk_skb: 65 callbacks suppressed
[   47.555571] audit: type=1400 audit(1556081071.940:133): apparmor="STATUS" operation="profile_replace" profile="unconfined" name="snap.gnome-logs.gnome-logs" pid=3874 comm="apparmor_parser"
[   47.647519] audit: type=1400 audit(1556081072.032:134): apparmor="STATUS" operation="profile_replace" profile="unconfined" name="snap-update-ns.gnome-logs" pid=3883 comm="apparmor_parser"
[   47.727376] audit: type=1400 audit(1556081072.112:135): apparmor="STATUS" operation="profile_replace" profile="unconfined" name="snap.gnome-logs.gnome-logs" pid=3884 comm="apparmor_parser"
[   47.903653] audit: type=1400 audit(1556081072.288:136): apparmor="STATUS" operation="profile_replace" profile="unconfined" name="snap.gnome-logs.gnome-logs" pid=3893 comm="apparmor_parser"
[   48.066671] audit: type=1400 audit(1556081072.452:137): apparmor="STATUS" operation="profile_replace" profile="unconfined" name="snap-update-ns.gnome-logs" pid=3892 comm="apparmor_parser"
[   48.095844] audit: type=1400 audit(1556081072.480:138): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="/snap/core/6350/usr/lib/snapd/snap-confine" pid=3901 comm="apparmor_parser"
[   48.095846] audit: type=1400 audit(1556081072.480:139): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="/snap/core/6350/usr/lib/snapd/snap-confine//mount-namespace-capture-helper" pid=3901 comm="apparmor_parser"
[   48.097904] audit: type=1400 audit(1556081072.484:140): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="snap-update-ns.core" pid=3903 comm="apparmor_parser"
[   48.098540] audit: type=1400 audit(1556081072.484:141): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="snap.core.hook.configure" pid=3904 comm="apparmor_parser"
[   48.351623] audit: type=1400 audit(1556081072.736:142): apparmor="STATUS" operation="profile_replace" profile="unconfined" name="snap.gnome-logs.gnome-logs" pid=3913 comm="apparmor_parser"
[   52.564931] kauditd_printk_skb: 49 callbacks suppressed
[   52.564932] audit: type=1400 audit(1556081076.952:192): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="/snap/core/6350/usr/lib/snapd/snap-confine" pid=4215 comm="apparmor_parser"
[   52.564934] audit: type=1400 audit(1556081076.952:193): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="/snap/core/6350/usr/lib/snapd/snap-confine//mount-namespace-capture-helper" pid=4215 comm="apparmor_parser"
[   52.567067] audit: type=1400 audit(1556081076.952:194): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="snap-update-ns.core" pid=4217 comm="apparmor_parser"
[   52.567658] audit: type=1400 audit(1556081076.952:195): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="snap.core.hook.configure" pid=4218 comm="apparmor_parser"
[   52.611479] audit: type=1400 audit(1556081076.996:196): apparmor="STATUS" operation="profile_replace" profile="unconfined" name="snap-update-ns.gnome-system-monitor" pid=4225 comm="apparmor_parser"
[   52.836464] audit: type=1400 audit(1556081077.224:197): apparmor="STATUS" operation="profile_replace" profile="unconfined" name="snap.gnome-system-monitor.gnome-system-monitor" pid=4226 comm="apparmor_parser"
[   52.865409] audit: type=1400 audit(1556081077.252:198): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="/snap/core/6350/usr/lib/snapd/snap-confine" pid=4233 comm="apparmor_parser"
[   52.865430] audit: type=1400 audit(1556081077.252:199): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="/snap/core/6350/usr/lib/snapd/snap-confine//mount-namespace-capture-helper" pid=4233 comm="apparmor_parser"
[   52.867914] audit: type=1400 audit(1556081077.252:200): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="snap-update-ns.core" pid=4235 comm="apparmor_parser"
[   52.868571] audit: type=1400 audit(1556081077.256:201): apparmor="STATUS" operation="profile_replace" info="same as current profile, skipping" profile="unconfined" name="snap.core.hook.configure" pid=4236 comm="apparmor_parser"
[   61.710694] wlp59s0: authenticate with 00:24:6c:85:2a:e8
[   61.754139] wlp59s0: send auth to 00:24:6c:85:2a:e8 (try 1/3)
[   61.755992] wlp59s0: authenticated
[   61.760119] wlp59s0: associate with 00:24:6c:85:2a:e8 (try 1/3)
[   61.762938] wlp59s0: RX AssocResp from 00:24:6c:85:2a:e8 (capab=0x411 status=0 aid=1)
[   61.765481] wlp59s0: associated
[   61.835200] IPv6: ADDRCONF(NETDEV_CHANGE): wlp59s0: link becomes ready
[  127.818632] NET: Registered protocol family 38
[  175.335647] EXT4-fs (dm-2): warning: mounting fs with errors, running e2fsck is recommended
[  175.338602] EXT4-fs (dm-2): Errors on filesystem, clearing orphan list.

[  175.338605] EXT4-fs (dm-2): recovery complete
[  175.340986] EXT4-fs (dm-2): mounted filesystem with ordered data mode. Opts: (null)
[  188.067827] EXT4-fs error (device dm-3): ext4_orphan_get:1256: comm mount: bad orphan inode 4854430
[  188.070080] ext4_test_bit(bit=4765, block=19398672) = 1
[  188.070082] is_bad_inode(inode)=0
[  188.070083] NEXT_ORPHAN(inode)=1555973074
[  188.070084] max_ino=13434880
[  188.070085] i_nlink=0
[  188.070092] EXT4-fs (dm-3): 1 orphan inode deleted
[  188.070093] EXT4-fs (dm-3): recovery complete
[  188.081825] EXT4-fs (dm-3): mounted filesystem with ordered data mode. Opts: (null)
[  272.054628] FAT-fs (nvme0n1p1): Volume was not properly unmounted. Some data may be corrupt. Please run fsck.
[  354.378941] EXT4-fs error (device dm-2): ext4_validate_inode_bitmap:100: comm pacman: Corrupt inode bitmap - block_group = 80, inode_bitmap = 2621456
[  354.397038] EXT4-fs error (device dm-2): ext4_validate_inode_bitmap:100: comm pacman: Corrupt inode bitmap - block_group = 82, inode_bitmap = 2621458
[  354.743561] EXT4-fs error (device dm-2): ext4_validate_block_bitmap:376: comm pacman: bg 85: bad block bitmap checksum
[  354.746258] EXT4-fs error (device dm-2): ext4_validate_block_bitmap:376: comm pacman: bg 88: bad block bitmap checksum
[  355.650102] EXT4-fs error (device dm-2): ext4_validate_block_bitmap:376: comm pacman: bg 90: bad block bitmap checksum
[  355.653219] EXT4-fs error (device dm-2): ext4_validate_block_bitmap:376: comm pacman: bg 94: bad block bitmap checksum
[  358.024419] EXT4-fs error (device dm-2): ext4_validate_block_bitmap:376: comm pacman: bg 98: bad block bitmap checksum
[  358.027053] EXT4-fs error (device dm-2): ext4_validate_block_bitmap:376: comm pacman: bg 100: bad block bitmap checksum
[  358.726255] EXT4-fs error (device dm-2): ext4_find_entry:1450: inode #680005: comm pacman: checksumming directory block 0
[  423.628273] EXT4-fs error (device dm-2) in ext4_free_inode:355: Corrupt filesystem
[  423.630552] EXT4-fs error (device dm-2) in ext4_free_inode:355: Corrupt filesystem
[  423.632948] EXT4-fs error (device dm-2) in ext4_free_inode:355: Corrupt filesystem
[  423.635180] EXT4-fs error (device dm-2) in ext4_free_inode:355: Corrupt filesystem
[  423.637543] EXT4-fs error (device dm-2) in ext4_free_inode:355: Corrupt filesystem
[  423.639831] EXT4-fs error (device dm-2) in ext4_free_inode:355: Corrupt filesystem
[  423.642354] EXT4-fs error (device dm-2): ext4_validate_block_bitmap:376: comm rm: bg 87: bad block bitmap checksum
[  423.644604] EXT4-fs error (device dm-2) in ext4_free_blocks:4943: Filesystem failed CRC
[  423.646930] EXT4-fs error (device dm-2) in ext4_free_inode:355: Corrupt filesystem
[  423.649307] EXT4-fs error (device dm-2) in ext4_free_inode:355: Corrupt filesystem
[  480.219205] EXT4-fs (dm-2): error count since last fsck: 118
[  480.219210] EXT4-fs (dm-2): initial error at time 1556074733: ext4_validate_block_bitmap:376
[  480.219214] EXT4-fs (dm-2): last error at time 1556081448: ext4_free_inode:355: inode 680005
[  496.602944] EXT4-fs (dm-3): error count since last fsck: 1
[  496.602968] EXT4-fs (dm-3): initial error at time 1556081212: ext4_orphan_get:1256
[  496.602978] EXT4-fs (dm-3): last error at time 1556081212: ext4_orphan_get:1256

Edit: I see the suggestion to run fsck, which I am currently doing some research on, but don't feel confident enough to mess around.  Probably will end up hurting things even worse.  Any help would be great, I'm hoping I can recover this install somehow.

Last edited by jiv222 (2019-04-24 05:09:31)

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#10 2019-04-24 07:52:12

seth
Member
Registered: 2012-09-03
Posts: 50,929

Re: Broken Filesystem after booting into old suspend image

Stupid question before I read the thread: do you boot an OS while another OS is in hibernation?
In case: don't.

How to upload text · How to boot w/o GUI · Disable Windows Fast-Start! · Fix your xinitrc

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#11 2019-04-24 13:10:54

jiv222
Member
Registered: 2019-01-14
Posts: 54

Re: Broken Filesystem after booting into old suspend image

After closing my computer like usual for the night, i woke up to an unbootable install. I then used a ubuntu media to mount and chroot into my system. I then rebooted and got a suspended state, which I guess was never deleted.

Is there any chance this was caused by something going wrong while mounting the API things like proc, and dev? I remember I was unable to unmount completely.

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#12 2019-04-24 13:15:17

seth
Member
Registered: 2012-09-03
Posts: 50,929

Re: Broken Filesystem after booting into old suspend image

> i woke up to an unbootable install
So the system is still in hibernation
> then used a ubuntu media to mount and chroot into my system
You mounted a disk that was left behind unclean by a hibernated system, fsck demand is expectable
> rebooted and got a suspended state
You're now resuming the hibernated system that will feel pissed, because you touched the FS during the ubuntu mount - another fsck demand is expectable

procfs and devs are stateless pseudo-FS, they will not taint your extfs partition.

How to upload text · How to boot w/o GUI · Disable Windows Fast-Start! · Fix your xinitrc

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#13 2019-04-24 13:27:38

jiv222
Member
Registered: 2019-01-14
Posts: 54

Re: Broken Filesystem after booting into old suspend image

Okay,  thanks for the info.  This makes sense, although only in hindsight..

How can I go about fixing this? (If it is still possible)
I was using the suspend-then-hibernate option as a systemd service.

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#14 2019-04-24 13:39:14

seth
Member
Registered: 2012-09-03
Posts: 50,929

Re: Broken Filesystem after booting into old suspend image

All you got to do is to get the system into a consistent state about who's in charge here and fsck from there.
In doubt that would be the resumed hibernation (if it still works) or complete reboot (after shutting down the hibernated system)

What you should absolutely NOT do is to fsck from any system while another system is in hibernation. S4 does NOT mean that the OS stopped, so in this setup you've essentially two OS attempting to control the same HW/FS.

Data integrity can no longer be guaranteed at this point, it's a matter of luck and how much the FS was sync'd during the hibernation.

How to upload text · How to boot w/o GUI · Disable Windows Fast-Start! · Fix your xinitrc

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#15 2019-04-24 13:45:26

jiv222
Member
Registered: 2019-01-14
Posts: 54

Re: Broken Filesystem after booting into old suspend image

Alright,  thanks.  I guess I'll give it a shot and see what happens. 

Before I proceed, I just want to clarify that I understand properly.  How can I go about doing this,  when I am unable to boot into Arch? Or how can I guarantee that chrooting in from Ubuntu will access a clean slate, and not the hibernation image?

As for fsck, is this the command I will be trying to use:

 fsck /dev/nvme0n1p2

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#16 2019-04-24 13:58:20

seth
Member
Registered: 2012-09-03
Posts: 50,929

Re: Broken Filesystem after booting into old suspend image

I thought you were able to resume the hibernated arch system now?
You mean you fail to boot the installed system entirely? At what point?

How to upload text · How to boot w/o GUI · Disable Windows Fast-Start! · Fix your xinitrc

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#17 2019-04-24 14:00:34

jiv222
Member
Registered: 2019-01-14
Posts: 54

Re: Broken Filesystem after booting into old suspend image

The error is the same as initially described above. When booting, I am not even taken to a prompt to unlock the encrypted drive. And instead am taken straight to the uefi bios menu.

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