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#1 2019-11-19 17:05:06

benedict_0
Member
Registered: 2019-11-08
Posts: 11

[SOLVED] ModuleNotFoundError: No module named 'pymc3'

Hi!

I have installed python and ipython from the repos. I have installed some more packages from the AUR, namely pymc3 with yay:
yay python-pymc3

It worked for a day or so, but now when I am in ipython trying to load pymc3
import pymc3
I get the following error message:
ModuleNotFoundError: No module named 'pymc3'

I suspect ipython doesn't know the path for the module anymore. How can I solve this problem?

Thank you!
Benedict

Last edited by benedict_0 (2019-11-19 20:51:12)

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#2 2019-11-19 17:35:49

loqs
Member
Registered: 2014-03-06
Posts: 9,305

Re: [SOLVED] ModuleNotFoundError: No module named 'pymc3'

Rebuild all python 3 AUR packages on the system after the python 3.8 update?

Last edited by loqs (2019-11-19 17:36:05)

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#3 2019-11-19 17:39:31

benedict_0
Member
Registered: 2019-11-08
Posts: 11

Re: [SOLVED] ModuleNotFoundError: No module named 'pymc3'

Hi loqs,

My only other AUR pacakge related to python is python-h5py. I reinstalled it through yay python-h5py (is that what you mean with a rebuild?) but it didn't solve the issue.

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#4 2019-11-19 17:55:31

loqs
Member
Registered: 2014-03-06
Posts: 9,305

Re: [SOLVED] ModuleNotFoundError: No module named 'pymc3'

What is the output of the following:

pacman -Q python ipython python-pymc3 
pacman -Ql python-pymc3

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#5 2019-11-19 17:58:26

benedict_0
Member
Registered: 2019-11-08
Posts: 11

Re: [SOLVED] ModuleNotFoundError: No module named 'pymc3'

python 3.8.0-1
ipython 7.9.0-3
python-pymc3 3.7-1
python-pymc3 /usr/
python-pymc3 /usr/lib/
python-pymc3 /usr/lib/python3.7/
python-pymc3 /usr/lib/python3.7/site-packages/
python-pymc3 /usr/lib/python3.7/site-packages/pymc3-3.7-py3.7.egg-info/
python-pymc3 /usr/lib/python3.7/site-packages/pymc3-3.7-py3.7.egg-info/PKG-INFO
python-pymc3 /usr/lib/python3.7/site-packages/pymc3-3.7-py3.7.egg-info/SOURCES.txt
python-pymc3 /usr/lib/python3.7/site-packages/pymc3-3.7-py3.7.egg-info/dependency_links.txt
python-pymc3 /usr/lib/python3.7/site-packages/pymc3-3.7-py3.7.egg-info/requires.txt
python-pymc3 /usr/lib/python3.7/site-packages/pymc3-3.7-py3.7.egg-info/top_level.txt
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__init__.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/__init__.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/__init__.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/blocking.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/blocking.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/data.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/data.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/diagnostics.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/diagnostics.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/exceptions.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/exceptions.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/math.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/math.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/memoize.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/memoize.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/model.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/model.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/model_graph.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/model_graph.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/parallel_sampling.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/parallel_sampling.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/sampling.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/sampling.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/stats.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/stats.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/theanof.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/theanof.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/util.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/util.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/vartypes.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/__pycache__/vartypes.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/__init__.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/__pycache__/
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/__pycache__/__init__.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/__pycache__/__init__.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/__pycache__/base.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/__pycache__/base.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/__pycache__/hdf5.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/__pycache__/hdf5.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/__pycache__/ndarray.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/__pycache__/ndarray.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/__pycache__/report.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/__pycache__/report.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/__pycache__/sqlite.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/__pycache__/sqlite.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/__pycache__/text.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/__pycache__/text.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/__pycache__/tracetab.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/__pycache__/tracetab.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/base.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/hdf5.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/ndarray.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/report.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/sqlite.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/text.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/backends/tracetab.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/blocking.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/data.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/diagnostics.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__init__.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/__init__.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/__init__.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/bound.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/bound.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/continuous.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/continuous.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/discrete.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/discrete.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/dist_math.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/dist_math.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/distribution.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/distribution.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/mixture.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/mixture.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/multivariate.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/multivariate.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/shape_utils.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/shape_utils.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/special.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/special.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/timeseries.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/timeseries.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/transforms.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/__pycache__/transforms.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/bound.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/continuous.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/discrete.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/dist_math.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/distribution.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/mixture.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/multivariate.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/shape_utils.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/special.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/timeseries.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/distributions/transforms.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/GHME_2013.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/LKJ_correlation.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__init__.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/GHME_2013.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/GHME_2013.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/LKJ_correlation.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/LKJ_correlation.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/__init__.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/__init__.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/arbitrary_stochastic.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/arbitrary_stochastic.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/arma_example.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/arma_example.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/baseball.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/baseball.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/custom_dists.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/custom_dists.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/disaster_model.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/disaster_model.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/disaster_model_theano_op.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/disaster_model_theano_op.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/factor_potential.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/factor_potential.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/garch_example.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/garch_example.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/gelman_bioassay.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/gelman_bioassay.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/gelman_schools.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/gelman_schools.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/lasso_missing.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/lasso_missing.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/lightspeed_example.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/lightspeed_example.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/rankdata_ordered.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/rankdata_ordered.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/samplers_mvnormal.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/samplers_mvnormal.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/simpletest.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/__pycache__/simpletest.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/arbitrary_stochastic.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/arma_example.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/baseball.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/custom_dists.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/Guber1999data.txt
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/HtWt.csv
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/SP500.csv
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/babies.csv
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/cty.dat
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/efron-morris-75-data.tsv
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/extrahard_MC_500_5_4.npz.npy
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/extrahard_MC_500_5_4_reference_classes.npy
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/mastectomy.csv
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/merged_ice_core_yearly.csv
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/milk.csv
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/monthly_in_situ_co2_mlo.csv
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/old_faithful.csv
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/pancreatitis.csv
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/radon.csv
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/rugby.csv
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/srrs2.dat
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/stock_prices.csv
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/sunspot.csv
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/test_scores.csv
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/data/wells.dat
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/disaster_model.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/examples/disaster_model_theano_op.py
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python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/checks.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/conftest.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/helpers.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/models.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/sampler_fixtures.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_data_container.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_diagnostics.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_dist_math.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_distribution_defaults.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_distributions.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_distributions_random.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_distributions_timeseries.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_examples.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_glm.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_gp.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_hdf5_backend.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_hmc.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_math.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_memo.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_minibatches.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_missing.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_mixture.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_model.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_model_func.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_model_graph.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_model_helpers.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_modelcontext.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_models_linear.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_models_utils.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_ndarray_backend.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_parallel_sampling.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_pickling.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_posdef_sym.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_posteriors.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_profile.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_quadpotential.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_random.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_sampling.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_shape_handling.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_shared.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_smc.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_special_functions.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_sqlite_backend.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_starting.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_stats.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_step.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_text_backend.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_theanof.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_tracetab.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_transforms.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_tuning.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_types.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_updates.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_util.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tests/test_variational_inference.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/theanof.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tuning/
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tuning/__init__.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tuning/__pycache__/
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tuning/__pycache__/__init__.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tuning/__pycache__/__init__.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tuning/__pycache__/scaling.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tuning/__pycache__/scaling.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tuning/__pycache__/starting.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tuning/__pycache__/starting.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tuning/scaling.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/tuning/starting.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/util.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/__init__.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/__pycache__/
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/__pycache__/__init__.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/__pycache__/__init__.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/__pycache__/approximations.cpython-37.opt-1.pyc
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python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/__pycache__/callbacks.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/__pycache__/callbacks.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/__pycache__/flows.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/__pycache__/flows.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/__pycache__/inference.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/__pycache__/inference.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/__pycache__/operators.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/__pycache__/operators.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/__pycache__/opvi.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/__pycache__/opvi.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/__pycache__/stein.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/__pycache__/stein.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/__pycache__/test_functions.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/__pycache__/test_functions.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/__pycache__/updates.cpython-37.opt-1.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/__pycache__/updates.cpython-37.pyc
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/approximations.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/callbacks.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/flows.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/inference.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/operators.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/opvi.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/stein.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/test_functions.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/variational/updates.py
python-pymc3 /usr/lib/python3.7/site-packages/pymc3/vartypes.py

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#6 2019-11-19 18:07:31

loqs
Member
Registered: 2014-03-06
Posts: 9,305

Re: [SOLVED] ModuleNotFoundError: No module named 'pymc3'

python-pymc3 /usr/lib/python3.7/site-packages/

python-pymc3 has not been rebuilt for python 3.8.  I do not use yay so I do not know what is required to perform a rebuild with it.
You can rebuild the package without an AUR helper using makepkg directly.

Last edited by loqs (2019-11-19 18:13:23)

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#7 2019-11-19 18:24:57

benedict_0
Member
Registered: 2019-11-08
Posts: 11

Re: [SOLVED] ModuleNotFoundError: No module named 'pymc3'

OK thanks. I don't know how to do that and the search for "rebuild" in the link you provide is not really fruitful, but I'll dig into that.

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#8 2019-11-19 18:30:44

teckk
Member
Registered: 2013-02-21
Posts: 323

Re: [SOLVED] ModuleNotFoundError: No module named 'pymc3'

I don't know how to do that and the search for "rebuild"

Get the PKGBUILD from AUR.
https://aur.archlinux.org/packages/python-pymc3/

Build the package with makepkg.

Then install the package with pacman -U.

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#9 2019-11-19 20:09:10

benedict_0
Member
Registered: 2019-11-08
Posts: 11

Re: [SOLVED] ModuleNotFoundError: No module named 'pymc3'

Thank you teckk. The page says python-pymc3 3.7-1 so I think I'm better off waiting, right?

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#10 2019-11-19 20:27:27

loqs
Member
Registered: 2014-03-06
Posts: 9,305

Re: [SOLVED] ModuleNotFoundError: No module named 'pymc3'

https://github.com/pymc-devs/pymc3/releases the release number being 3.7 is not related to python version 3.7/3.8
I just built the package locally using python3.8 after building required AUR package python-theano also against 3.8 without issue.

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#11 2019-11-19 20:49:54

benedict_0
Member
Registered: 2019-11-08
Posts: 11

Re: [SOLVED] ModuleNotFoundError: No module named 'pymc3'

Thank you loqs. So it worked with (for me)

yay python-pymc3
yay python-theano

because when reading carefully the messages, it offered the possibility to rebuid.

I was wrong when asserting that python-h5py also was from the AUR (it is not).

This raises another question (I'm new to arch, coming from ubuntu): is this a normal behaviour?

A system update (which in my understanding can be rather frequent in arch) broke a piece of software and never prompted me with the necessity of rebuilding those two packages.

Last edited by benedict_0 (2019-11-19 20:50:34)

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#12 2019-11-19 21:00:25

loqs
Member
Registered: 2014-03-06
Posts: 9,305

Re: [SOLVED] ModuleNotFoundError: No module named 'pymc3'

Supported packages in the repository should not have such issues.  If they do they should be reported as bugs.
AUR is unsupported/community provided PKGBUILDs user are expected to maintain themselves.
You are expected to judge the PKGBUILD quality of AUR packages you use.  PKGBUILDs via install files can execute any command with root privileges.
If you are new to arch you may want to stop using yay and AUR until you are more familiar with what is supported.
Edit:
Further exemplification

$ pacman -Qi pacman
Name            : pacman
Version         : 5.2.1-1
Description     : A library-based package manager with dependency support
....
Packager        : Allan McRae <allan@archlinux.org>
Build Date      : Fri 01 Nov 2019 04:08:30 UTC
Install Date    : Sun 03 Nov 2019 20:17:20 UTC
Install Reason  : Explicitly installed
Install Script  : No
Validated By    : Signature

For the supported package pacman compare the Packager and Validated By entries with a custom package I built

Packager        : Unknown Packager
Build Date      : Tue 12 Nov 2019 19:46:55 UTC
Install Date    : Tue 12 Nov 2019 19:58:52 UTC
Install Reason  : Explicitly installed
Install Script  : No
Validated By    : None

Last edited by loqs (2019-11-19 21:15:58)

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#13 2019-11-20 09:17:48

benedict_0
Member
Registered: 2019-11-08
Posts: 11

Re: [SOLVED] ModuleNotFoundError: No module named 'pymc3'

Thanks loqs, it clarifies the situation.

I thought the question of using AUR PKGBUILDs was only a question of trust of the maintainer/community. Now I understand there is also a question of maintenance I have to do by myself.

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