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#1 2021-05-10 12:28:11

malacology
Member
Registered: 2021-04-24
Posts: 152

How to change the owner of user in PKGBUILD

The author of the software told me that I need to type the command of the following if I want to run the program.

sudo chown -R 'whoami' path/to/PhyloSuite(folder)

How can I do it in PKGBUILD? Every user has a different "whoami".


Don't speak to silly man. Keep Minimalism.

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#2 2021-05-10 12:30:55

Scimmia
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Registered: 2012-09-01
Posts: 11,463

Re: How to change the owner of user in PKGBUILD

Sounds like something you'd have to make world writable. Not really something you can sanely package, unfortunately.

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#3 2021-05-10 12:39:17

icar
Member
From: Catalunya
Registered: 2020-07-31
Posts: 442

Re: How to change the owner of user in PKGBUILD

You can't use $USER ?

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#4 2021-05-10 12:39:22

Trilby
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Registered: 2011-11-29
Posts: 29,445
Website

Re: How to change the owner of user in PKGBUILD

What is "path/to/PhyloSuite"?  You may be able to echo a message telling the user what they should do.  But this only applies if the path is actually user specific such as something under their $HOME or perhaps under /var/run/$UID or similar.  But how could a path possibly be owned by the "user" on a multiuser system (other than being world-writable as noted above)?


"UNIX is simple and coherent..." - Dennis Ritchie, "GNU's Not UNIX" -  Richard Stallman

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#5 2021-05-10 13:00:18

Lone_Wolf
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From: Netherlands, Europe
Registered: 2005-10-04
Posts: 11,868

Re: How to change the owner of user in PKGBUILD

Are you trying to create a PKGBUILD for https://dongzhang0725.github.io/ ?

If so, it appears to be a python package .

read https://wiki.archlinux.org/title/Python … guidelines


Disliking systemd intensely, but not satisfied with alternatives so focusing on taming systemd.


(A works at time B)  && (time C > time B ) ≠  (A works at time C)

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#6 2021-05-10 13:06:55

Scimmia
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Registered: 2012-09-01
Posts: 11,463

Re: How to change the owner of user in PKGBUILD

Being a python package doesn't have anything to do with bad coding. You come across software, especially when written by academics, that just wants to write settings, data, etc to whatever dir it's running from instead of using XDG_CONFIG_HOME, ~/.config/, etc.

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#7 2021-05-10 13:17:45

loqs
Member
Registered: 2014-03-06
Posts: 17,195

Re: How to change the owner of user in PKGBUILD

Scimmia wrote:

You come across software, especially when written by academics, that just wants to write settings, data, etc to whatever dir it's running from instead of using XDG_CONFIG_HOME, ~/.config/, etc.

https://github.com/dongzhang0725/PhyloS … ory.py#L43

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#8 2021-05-10 14:10:50

malacology
Member
Registered: 2021-04-24
Posts: 152

Re: How to change the owner of user in PKGBUILD

Trilby wrote:

What is "path/to/PhyloSuite"?  You may be able to echo a message telling the user what they should do.  But this only applies if the path is actually user specific such as something under their $HOME or perhaps under /var/run/$UID or similar.  But how could a path possibly be owned by the "user" on a multiuser system (other than being world-writable as noted above)?

This may be the final decision, but maybe great. Thanks for your idea.


Don't speak to silly man. Keep Minimalism.

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#9 2021-05-10 14:12:45

malacology
Member
Registered: 2021-04-24
Posts: 152

Re: How to change the owner of user in PKGBUILD

Lone_Wolf wrote:

Are you trying to create a PKGBUILD for https://dongzhang0725.github.io/ ?

If so, it appears to be a python package .

read https://wiki.archlinux.org/title/Python … guidelines

Right, I am making PKGBUILD for phylosuite. I have checked the guide but maybe is not useful for this package. Thanks.


Don't speak to silly man. Keep Minimalism.

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#10 2021-05-10 14:14:43

malacology
Member
Registered: 2021-04-24
Posts: 152

Re: How to change the owner of user in PKGBUILD

My PKGBUILD is here

# Maintainer: malacology
# Contributor: malacology

pkgname=phylosuite
pkgver=1.2.2
pkgrel=1
pkgdesc="PhyloSuite is an integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies"
arch=('x86_64')
url="https://github.com/dongzhang0725/PhyloSuite"
license=('GPL3')
depends=(
	'python>=3.6'
)
source=("https://github.com/dongzhang0725/PhyloSuite/releases/download/${pkgver}/PhyloSuite_v${pkgver}_Linux.tar.gz" "PhyloSuite.desktop" "PhyloSuite.png")
md5sums=('9d43b3b2b9b076071f29f7c8f0689bd5'
         '4f07dedd56f9e15909033adf04fcef81'
         'aca08e388f8d6a180a570b31ccebe764')

package() {
  install -dm755 "$pkgdir"/usr/{bin,share/{phylosuite,applications}}
  mv "$srcdir"/PhyloSuite/* "$pkgdir"/usr/share/phylosuite
  chmod -R 755  "$pkgdir"/usr/share/phylosuite
  "$pkgdir"/usr/share/phylosuite/PhyloSuite
  install -m 755 "$srcdir"/PhyloSuite.png "$pkgdir"/usr/share/phylosuite/
  install -m 755 "$srcdir"/PhyloSuite.desktop "$pkgdir"/usr/share/applications/
}

Don't speak to silly man. Keep Minimalism.

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#11 2021-05-10 15:02:12

Trilby
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Registered: 2011-11-29
Posts: 29,445
Website

Re: How to change the owner of user in PKGBUILD

That's precompiled content with .so files that link to old versions of libraries no longer in the arch repos.  If the source is available, it needs to be built from source.

Worse yet, running makepkg on that causes the software (GUI software at that) to run!  (edit: I suppose this partially deflates the first concern.  Some libraries may be improperly linked, but they may not be necessary to the basic functioning of the software - but still, it'll likely result in problems).

EDIT 2: it seems you explicitly run the program from the PKGBUILD.  Don't do that.  It will prompt on the first run for the storage location *after* it is installed.  And it actually properly uses ~/.config for this data.

Also, it seems to run fine even without modifying permissions or ownership.  What problem was this thread actually set out to solve?  You do need to either move the binary to /usr/bin/ or put a launcher script into /usr/bin.  But I'm not sure why you thought anything needed to be owned by the user.

Last edited by Trilby (2021-05-10 15:11:23)


"UNIX is simple and coherent..." - Dennis Ritchie, "GNU's Not UNIX" -  Richard Stallman

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#12 2021-05-10 15:25:02

Slithery
Administrator
From: Norfolk, UK
Registered: 2013-12-01
Posts: 5,776

Re: How to change the owner of user in PKGBUILD

Also please edit pkgdesc to remove the name of the software...
https://wiki.archlinux.org/title/PKGBUILD#pkgdesc


No, it didn't "fix" anything. It just shifted the brokeness one space to the right. - jasonwryan
Closing -- for deletion; Banning -- for muppetry. - jasonwryan

aur - dotfiles

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#13 2021-05-10 16:00:25

malacology
Member
Registered: 2021-04-24
Posts: 152

Re: How to change the owner of user in PKGBUILD

Trilby wrote:

That's precompiled content with .so files that link to old versions of libraries no longer in the arch repos.  If the source is available, it needs to be built from source.

Worse yet, running makepkg on that causes the software (GUI software at that) to run!  (edit: I suppose this partially deflates the first concern.  Some libraries may be improperly linked, but they may not be necessary to the basic functioning of the software - but still, it'll likely result in problems).

EDIT 2: it seems you explicitly run the program from the PKGBUILD.  Don't do that.  It will prompt on the first run for the storage location *after* it is installed.  And it actually properly uses ~/.config for this data.

Also, it seems to run fine even without modifying permissions or ownership.  What problem was this thread actually set out to solve?  You do need to either move the binary to /usr/bin/ or put a launcher script into /usr/bin.  But I'm not sure why you thought anything needed to be owned by the user.

Because if I only do what you said, the package would not be running, the author of the software told me this solution. You said that it  run fine even without modifying permissions or ownership, but problem occurs to me.

# From Report of the software
Traceback (most recent call last):
  File "PhyloSuite/PhyloSuite.py", line 124, in <module>
  File "PhyloSuite/PhyloSuite.py", line 107, in start
  File "PhyloSuite/src/main.py", line 133, in __init__
PermissionError: [Errno 13] Permission denied: '/usr/share/phylosuite/style.qss'
# From output
/usr/lib/gvfs/libgvfscommon.so: undefined symbol: g_task_set_name
Failed to load module: /usr/lib/gio/modules/libgvfsdbus.so

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:15:22: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:18:22: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:60:2: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:79:19: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:89:119: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:94:131: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:98:149: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:102:6: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:131:112: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:195:13: 'caret-color' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:202:6: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:206:16: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:225:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:240:23: No property named '-gtk-icon-transform'

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:250:8: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:255:8: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:262:32: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:274:44: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:280:20: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:286:20: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:293:42: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:301:38: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:306:44: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:312:26: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:317:43: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:323:44: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:329:48: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:342:49: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:355:44: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:363:56: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:369:26: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:376:48: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:384:60: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:390:28: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:397:41: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:404:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:413:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:418:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:422:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:428:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:436:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:441:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:447:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:451:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:455:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:459:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:467:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:472:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:478:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:482:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:486:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:508:20: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:530:18: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:550:1106: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:554:31: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:558:31: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:562:44: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:574:50: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:578:50: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:582:51: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:590:44: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:596:44: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:602:44: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:606:44: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:613:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:614:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:620:7: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:626:330: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:645:378: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:657:378: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:669:386: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:683:51: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:696:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:704:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:713:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:719:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:725:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:730:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:751:38: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:755:8: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:759:8: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:763:8: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:775:11: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:785:24: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:795:24: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:799:24: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:812:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:818:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:828:26: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:838:26: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:842:26: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:855:31: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:861:31: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:875:41: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:885:112: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:894:312: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:914:8: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:918:8: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:923:8: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:928:8: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:932:70: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:936:94: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:941:92: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:946:92: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:953:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:968:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:969:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:976:2: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:980:2: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:984:12: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:988:12: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:993:22: 'text-decoration-line' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:999:11: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1003:11: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1012:11: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1016:11: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1021:11: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1025:11: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1033:20: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1043:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1044:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1053:33: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1066:20: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1072:20: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1082:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1083:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1103:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1126:19: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1130:19: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1135:19: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1140:19: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1148:8: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1153:8: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1158:28: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1163:28: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1187:24: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1192:24: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1241:8: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1248:8: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1254:8: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1260:8: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1265:8: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1295:37: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1299:38: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1303:43: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1307:37: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1311:37: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1316:46: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1320:52: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1324:46: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1328:46: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1332:46: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1341:36: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1354:42: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1366:10: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1375:19: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1409:18: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1413:34: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1426:31: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1430:39: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1448:35: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1452:32: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1457:32: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1461:32: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1466:32: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1470:32: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1474:32: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1478:32: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1482:32: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1510:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1526:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1527:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1532:12: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1542:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1546:10: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1582:53: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1589:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1613:17: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1620:21: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1625:21: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1631:27: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1636:27: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1642:17: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1647:17: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1655:127: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1669:145: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1674:139: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1678:147: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1683:14: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1689:20: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1693:21: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1697:145: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1703:163: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1707:23: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1711:157: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1715:23: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1719:151: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1726:181: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1730:141: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1737:171: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1741:141: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1750:28: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1754:141: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1758:152: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1762:138: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1777:147: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1805:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1817:19: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1822:25: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1851:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1852:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1866:14: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1875:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1876:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1904:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1905:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1933:20: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1937:13: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1955:9: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1990:133: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:1999:25: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2008:36: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2012:36: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2016:36: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2020:36: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2026:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2044:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2045:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2061:13: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2065:13: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2073:13: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2077:30: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2099:19: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2217:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2218:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2228:28: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2248:27: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2252:27: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2265:28: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2269:28: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2277:17: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2313:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2314:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2329:17: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2334:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2335:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2346:28: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2350:28: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2355:28: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2362:28: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2373:28: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2377:39: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2381:39: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2385:37: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2389:37: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2398:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2402:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2406:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2407:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2442:7: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2446:7: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2457:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2458:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2478:7: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2486:25: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2498:25: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2504:25: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2509:25: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2524:30: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2531:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2532:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2537:6: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2543:6: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2549:6: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2554:222: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2560:31: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2588:20: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2592:68: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2602:6: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2607:6: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2617:6: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2622:6: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2628:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2629:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2634:49: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2639:49: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2646:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2647:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2652:49: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2657:49: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2662:133: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2669:139: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2680:133: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2687:139: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2697:20: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2704:20: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2714:20: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2724:20: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2733:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2734:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2746:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2747:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2752:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2758:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2773:13: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2779:20: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2782:16: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2792:11: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2806:99: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2809:13: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2829:99: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2884:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2885:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2889:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2890:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2893:30: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2897:30: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2901:30: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2905:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2909:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2913:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2917:28: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2921:28: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2925:28: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2929:27: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2933:27: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2937:27: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2942:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2943:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2983:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:2988:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3002:5: 'all' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3009:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3013:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3016:35: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3021:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3025:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3028:33: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3040:36: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3080:118: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3207:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3208:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3214:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3215:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3231:40: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3241:46: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3245:46: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3250:55: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3272:13: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3284:37: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3298:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3299:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3309:23: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3317:23: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3330:9: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3349:9: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3361:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3386:44: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3390:44: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3394:63: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3425:188: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3458:118: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3463:78: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3482:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3515:23: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3528:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3548:26: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3584:26: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3593:31: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3606:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3607:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3611:20: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3617:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3618:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3620:20: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3673:87: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3682:218: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3686:34: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3699:223: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3703:35: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3716:213: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3720:33: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3751:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3778:42: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3783:50: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3788:42: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3793:50: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3819:12: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3823:12: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3906:105: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3911:307: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3917:28: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3952:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3953:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3966:1: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3971:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3978:21: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3984:21: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3988:21: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3992:21: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:3997:21: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4003:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4008:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4009:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4039:21: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4043:21: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4048:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4049:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4072:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4138:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4146:77: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4151:77: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4188:77: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4214:55: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4219:55: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4223:55: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4241:49: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4246:43: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4250:43: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4254:43: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4263:53: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4285:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4286:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4295:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4351:37: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4355:37: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4359:47: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4366:47: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4370:47: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4374:59: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4379:72: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4383:72: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4387:47: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4414:14: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4427:32: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4448:32: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4452:32: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4456:32: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4460:32: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4464:32: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4473:28: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4496:151: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4523:32: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4536:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4540:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4545:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4550:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4554:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4558:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4563:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4567:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4571:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4575:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4579:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4583:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4592:97: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4596:98: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4619:846: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4625:1435: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4630:1415: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4635:1415: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4639:1315: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4645:254: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4652:263: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4659:269: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4666:20: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4684:20: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4689:20: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4693:20: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4723:20: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4729:77: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4734:76: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4746:30: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4790:115: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4810:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4821:112: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4829:39: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4871:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4872:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4926:87: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4941:78: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4948:91: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:4953:91: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5003:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5076:15: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5080:8: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5084:25: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5136:27: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5167:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5168:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5174:20: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5187:8: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5205:34: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5209:35: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5236:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5250:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5254:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5262:25: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5270:28: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5294:20: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5297:63: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5306:72: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5314:72: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5326:32: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5369:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5374:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5400:273: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5404:297: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5408:309: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5412:333: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5417:20: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5444:37: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5452:66: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5456:66: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5463:104: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5479:84: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5488:99: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5495:87: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5551:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5566:89: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5571:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5622:20: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5629:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5640:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5691:34: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5735:88: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5744:114: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5748:118: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5772:63: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5776:381: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5798:20: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5806:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5814:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5815:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5869:36: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5890:421: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5895:362: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5935:35: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5941:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5950:35: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5964:20: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5973:49: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5978:49: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:5984:49: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6001:37: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6013:18: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6030:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6033:36: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6049:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6050:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6056:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6057:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6078:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6079:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6088:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6089:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6166:12: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6171:12: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6219:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6220:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6226:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6230:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6258:40: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6271:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6280:16: Expected a number

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6283:38: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6296:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6300:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6305:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6349:31: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6360:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6391:13: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6406:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6407:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6413:18: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6466:36: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6509:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6536:225: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6549:243: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6558:225: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6565:243: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6655:20: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6724:39: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6730:39: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6734:46: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6749:28: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6756:28: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6778:40: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6784:40: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6839:41: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6916:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6917:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6925:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6926:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6939:20: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6947:20: Not a valid image

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6950:92: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6954:98: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6993:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:6994:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7032:24: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7040:24: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7044:24: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7069:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7076:35: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7080:35: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7084:35: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7088:50: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7092:53: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7096:51: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7100:52: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7105:16: Expected a number

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7108:36: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7113:16: Expected a number

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7116:39: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7121:16: Expected a number

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7124:37: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7129:16: Expected a number

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7132:38: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7176:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7188:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7243:152: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7248:158: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7271:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7294:31: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7325:29: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7400:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7401:11: 'min-width' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7407:16: Expected a number

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7410:41: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7471:23: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7489:126: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7522:33: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7548:24: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7561:12: 'min-height' is not a valid property name

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7571:162: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7575:49: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7579:37: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7588:40: Missing name of pseudo-class

(PhyloSuite:3688): Gtk-WARNING **: Theme parsing error: gtk.css:7592:39: Missing name of pseudo-class
Gtk-Message: Failed to load module "canberra-gtk-module"
Fontconfig warning: line 5: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/10-hinting-slight.conf", line 4: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/10-scale-bitmap-fonts.conf", line 4: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/20-unhint-small-vera.conf", line 4: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/30-metric-aliases.conf", line 4: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/40-nonlatin.conf", line 4: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/45-generic.conf", line 4: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/45-latin.conf", line 4: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/49-sansserif.conf", line 4: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/50-user.conf", line 4: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/51-local.conf", line 4: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/60-generic.conf", line 4: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/60-latin.conf", line 4: unknown element "description"
Fontconfig warning: "/etc/fonts/conf.d/65-nonlatin.conf", line 4: unknown element "description"
Traceback (most recent call last):
  File "PhyloSuite/PhyloSuite.py", line 124, in <module>
  File "PhyloSuite/PhyloSuite.py", line 107, in start
  File "PhyloSuite/src/main.py", line 133, in __init__
PermissionError: [Errno 13] Permission denied: '/usr/share/phylosuite/style.qss'

Last edited by malacology (2021-05-10 16:08:58)


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#14 2021-05-10 16:01:51

malacology
Member
Registered: 2021-04-24
Posts: 152

Re: How to change the owner of user in PKGBUILD

Slithery wrote:

Also please edit pkgdesc to remove the name of the software...
https://wiki.archlinux.org/title/PKGBUILD#pkgdesc

Okay, thanks for your suggestion


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#15 2021-05-10 16:46:33

malacology
Member
Registered: 2021-04-24
Posts: 152

Re: How to change the owner of user in PKGBUILD

I try to change my thinking and makepkg via source code (I haven't use the updpkgsums )

# Maintainer: malacology
# Contributor: malacology

pkgname=phylosuite
pkgver=1.2.2
pkgrel=1
pkgdesc="an integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies"
arch=('x86_64')
url="https://github.com/dongzhang0725/PhyloSuite"
license=('GPL3')
depends=(
	'python>=3.6'
)
source=("https://github.com/dongzhang0725/PhyloSuite/archive/refs/tags/${pkgver}.zip")
md5sums=('SKIP')

package() {
  install -dm755 "$pkgdir"/usr/share/{phylosuite,applications}
  cd "$srcdir/PhyloSuite-$pkgver"
  python setup.py install --root="$pkgdir" --optimize=1
}

But when I python PhyloSuite, error report

Traceback (most recent call last):
  File "/home/guoyi/Downloads/py/pkg/phylosuite/usr/bin/./PhyloSuite", line 33, in <module>
    sys.exit(load_entry_point('PhyloSuite==1.2.2', 'console_scripts', 'PhyloSuite')())
  File "/home/guoyi/Downloads/py/pkg/phylosuite/usr/bin/./PhyloSuite", line 22, in importlib_load_entry_point
    for entry_point in distribution(dist_name).entry_points
  File "/usr/lib/python3.9/importlib/metadata.py", line 524, in distribution
    return Distribution.from_name(distribution_name)
  File "/usr/lib/python3.9/importlib/metadata.py", line 187, in from_name
    raise PackageNotFoundError(name)
importlib.metadata.PackageNotFoundError: PhyloSuite

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#16 2021-05-10 16:58:08

Scimmia
Fellow
Registered: 2012-09-01
Posts: 11,463

Re: How to change the owner of user in PKGBUILD

You're running it from the build dir, I'm guessing you didn't install the package?

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#17 2021-05-10 17:03:50

malacology
Member
Registered: 2021-04-24
Posts: 152

Re: How to change the owner of user in PKGBUILD

Scimmia wrote:

You're running it from the build dir, I'm guessing you didn't install the package?

right, I use makepkg to test it


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#18 2021-05-10 18:22:17

Trilby
Inspector Parrot
Registered: 2011-11-29
Posts: 29,445
Website

Re: How to change the owner of user in PKGBUILD

That's not a reasonable way to test it.  I just built and installed with the new PKGBUILD - this is a much better approach.  It currently fails though, but it appears only due to missing dependencies.  First python-dateutil is a dependency, and then so is a provider of the python modual "Bio" which I think would be python-biopython.  I stopped testing there as the dependencies should be listed in the PKGBUILD (they are listed in setup.py).

I believe the following should do, testing now:

depends=(python python-biopython python-dateutil python-psutil python-pyqt5 python-reportlab python-suds)

Also, this should be an -any package, not a x86_64.


EDIT: with the dependencies I was able to hit a new Tracebacks due to the code using Bio.Alphabet which has been dropped from biopython.  Following biopython upstream advice, I removed the includes for Bio.Alphabet which allowed the program to run, but it gave a gnome style error on startup saying "something" went wrong.  The Bio.Alphabet issue has been reported upstream, though the response doesn't suggest that a fix will be forthcoming: https://github.com/dongzhang0725/PhyloSuite/issues/24.  This may thus require a venv/virtual-env but I have virtually (pun intended) no experience with those and certainly not using them in packages.

TANGENTIAL NOTE: the license should be AGPL3, not GPL3.

Last edited by Trilby (2021-05-10 18:42:12)


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#19 2021-05-10 19:01:50

eschwartz
Fellow
Registered: 2014-08-08
Posts: 4,097

Re: How to change the owner of user in PKGBUILD

Trilby wrote:

EDIT: with the dependencies I was able to hit a new Tracebacks due to the code using Bio.Alphabet which has been dropped from biopython.  Following biopython upstream advice, I removed the includes for Bio.Alphabet which allowed the program to run, but it gave a gnome style error on startup saying "something" went wrong.  The Bio.Alphabet issue has been reported upstream, though the response doesn't suggest that a fix will be forthcoming: https://github.com/dongzhang0725/PhyloSuite/issues/24.  This may thus require a venv/virtual-env but I have virtually (pun intended) no experience with those and certainly not using them in packages.

That's an amazing bug report.

"Hi, your software fails if you use the README.md instructions to pip install it".

"Did you try using the packaged installation tarball?"


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#20 2021-05-11 03:14:22

malacology
Member
Registered: 2021-04-24
Posts: 152

Re: How to change the owner of user in PKGBUILD

He asked me to use python 3.6.7 and biopython 1.71, It seems that this app is not suitable to run on Arch


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#21 2021-05-11 03:17:14

malacology
Member
Registered: 2021-04-24
Posts: 152

Re: How to change the owner of user in PKGBUILD

Trilby wrote:

That's not a reasonable way to test it.  I just built and installed with the new PKGBUILD - this is a much better approach.  It currently fails though, but it appears only due to missing dependencies.  First python-dateutil is a dependency, and then so is a provider of the python modual "Bio" which I think would be python-biopython.  I stopped testing there as the dependencies should be listed in the PKGBUILD (they are listed in setup.py).

I believe the following should do, testing now:

depends=(python python-biopython python-dateutil python-psutil python-pyqt5 python-reportlab python-suds)

Also, this should be an -any package, not a x86_64.


EDIT: with the dependencies I was able to hit a new Tracebacks due to the code using Bio.Alphabet which has been dropped from biopython.  Following biopython upstream advice, I removed the includes for Bio.Alphabet which allowed the program to run, but it gave a gnome style error on startup saying "something" went wrong.  The Bio.Alphabet issue has been reported upstream, though the response doesn't suggest that a fix will be forthcoming: https://github.com/dongzhang0725/PhyloSuite/issues/24.  This may thus require a venv/virtual-env but I have virtually (pun intended) no experience with those and certainly not using them in packages.

TANGENTIAL NOTE: the license should be AGPL3, not GPL3.

Thanks, I corrected and it seems that it's difficult to build from source code


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#22 2021-05-11 09:48:13

Lone_Wolf
Member
From: Netherlands, Europe
Registered: 2005-10-04
Posts: 11,868

Re: How to change the owner of user in PKGBUILD

malacology wrote:

He asked me to use python 3.6.7 and biopython 1.71, It seems that this app is not suitable to run on Arch

Python 3.6.13 is present in AUR, if this app is important to you try to build against that.

(Ofcourse you would first have to create a biopython 1.71 package)


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