Arch Linux

miguimon

Member

From: Sydney

Registered: 2008-02-28

Posts: 37

Website

Broken system after upgrading package-query

Hi,

I've a server (x86_64) and after updating the system with yaourt -Syu my server is totally unusable, very strange. Here is the output after the update:

==> Package upgrade only (new release):
core/glibc                2.12-2  2 -> 4
archlinuxfr/package-query 0.3-1   1 -> 2

==> Software upgrade (new version) :
core/libtool              2.2.8-1 -> 2.2.10-1
core/man-pages            3.24-1  -> 3.25-1
extra/libxfont            1.4.1-1 -> 1.4.2-1

==> Continue upgrade ? [Y/n]
==> [V]iew package detail   [M]anually select packages
==> --------------------------------------------------
==> 
:: Starting full system upgrade...
resolving dependencies...
looking for inter-conflicts...

Targets (5): glibc-2.12-4  libtool-2.2.10-1  libxfont-1.4.2-1  man-pages-3.25-1  package-query-0.3-2

Total Download Size:    11.93 MB
Total Installed Size:   51.07 MB

Proceed with installation? [Y/n] 
:: Retrieving packages from core...
--2010-06-26 03:29:23--  http://mirrors.kernel.org/archlinux/core/os/x86_64/glibc-2.12-4-x86_64.pkg.tar.xz
Resolving mirrors.kernel.org... 149.20.20.135, 204.152.191.39
Connecting to mirrors.kernel.org|149.20.20.135|:80... connected.
HTTP request sent, awaiting response... 200 OK
Length: 7516132 (7.2M) [application/x-tar]
Saving to: `/var/cache/pacman/pkg/glibc-2.12-4-x86_64.pkg.tar.xz.part'

100%[=====================================================================================================================>] 7,516,132   12.9M/s   in 0.6s    

2010-06-26 03:29:24 (12.9 MB/s) - `/var/cache/pacman/pkg/glibc-2.12-4-x86_64.pkg.tar.xz.part' saved [7516132/7516132]

--2010-06-26 03:29:24--  http://mirrors.kernel.org/archlinux/core/os/x86_64/libtool-2.2.10-1-x86_64.pkg.tar.xz
Resolving mirrors.kernel.org... 149.20.20.135, 204.152.191.39
Connecting to mirrors.kernel.org|149.20.20.135|:80... connected.
HTTP request sent, awaiting response... 200 OK
Length: 367940 (359K) [application/x-tar]
Saving to: `/var/cache/pacman/pkg/libtool-2.2.10-1-x86_64.pkg.tar.xz.part'

100%[=====================================================================================================================>] 367,940     --.-K/s   in 0.03s   

2010-06-26 03:29:24 (11.1 MB/s) - `/var/cache/pacman/pkg/libtool-2.2.10-1-x86_64.pkg.tar.xz.part' saved [367940/367940]

--2010-06-26 03:29:24--  http://mirrors.kernel.org/archlinux/core/os/x86_64/man-pages-3.25-1-any.pkg.tar.xz
Resolving mirrors.kernel.org... 149.20.20.135, 204.152.191.39
Connecting to mirrors.kernel.org|149.20.20.135|:80... connected.
HTTP request sent, awaiting response... 200 OK
Length: 4483884 (4.3M) [application/x-tar]
Saving to: `/var/cache/pacman/pkg/man-pages-3.25-1-any.pkg.tar.xz.part'

100%[=====================================================================================================================>] 4,483,884   17.5M/s   in 0.2s    

2010-06-26 03:29:24 (17.5 MB/s) - `/var/cache/pacman/pkg/man-pages-3.25-1-any.pkg.tar.xz.part' saved [4483884/4483884]

:: Retrieving packages from extra...
--2010-06-26 03:29:24--  http://mirrors.kernel.org/archlinux/extra/os/x86_64/libxfont-1.4.2-1-x86_64.pkg.tar.xz
Resolving mirrors.kernel.org... 149.20.20.135, 204.152.191.39
Connecting to mirrors.kernel.org|149.20.20.135|:80... connected.
HTTP request sent, awaiting response... 200 OK
Length: 122584 (120K) [application/x-tar]
Saving to: `/var/cache/pacman/pkg/libxfont-1.4.2-1-x86_64.pkg.tar.xz.part'

100%[=====================================================================================================================>] 122,584     --.-K/s   in 0.009s 


:: Retrieving packages from archlinuxfr...
--2010-06-26 03:29:24--  http://repo.archlinux.fr/x86_64/package-query-0.3-2-x86_64.pkg.tar.xz
Resolving repo.archlinux.fr... 213.186.62.207
Connecting to repo.archlinux.fr|213.186.62.207|:80... connected.
HTTP request sent, awaiting response... 200 OK
Length: 16176 (16K) [application/octet-stream]
Saving to: `/var/cache/pacman/pkg/package-query-0.3-2-x86_64.pkg.tar.xz.part'

100%[=====================================================================================================================>] 16,176      44.5K/s   in 0.4s    

2010-06-26 03:29:25 (44.5 KB/s) - `/var/cache/pacman/pkg/package-query-0.3-2-x86_64.pkg.tar.xz.part' saved [16176/16176]

checking package integrity...
(5/5) checking for file conflicts                                                               [########################################################] 100%
(1/5) upgrading glibc                                                                           [########################################################] 100%
error: command failed to execute correctly
(2/5) upgrading libtool                                                                         [########################################################] 100%
error: command failed to execute correctly
(3/5) upgrading libxfont                                                                        [########################################################] 100%
(4/5) upgrading man-pages                                                                       [########################################################] 100%
(5/5) upgrading package-query                                                                   [########################################################] 100%
error: command failed to execute correctly
/usr/bin/yaourt: line 186: /usr/bin/sort: No such file or directory
/usr/lib/yaourt/basicfunctions.sh: line 10: /usr/bin/pacman: No such file or directory
/usr/bin/yaourt: line 187: /usr/bin/sort: No such file or directory
/usr/lib/yaourt/basicfunctions.sh: line 10: /usr/bin/pacman: No such file or directory
/usr/bin/yaourt: line 188: /bin/awk: No such file or directory
/usr/bin/yaourt: line 190: /usr/bin/comm: No such file or directory
/usr/bin/yaourt: line 191: /usr/bin/comm: No such file or directory
/usr/bin/yaourt: line 194: /usr/bin/comm: No such file or directory
/usr/bin/yaourt: line 201: /usr/bin/testdb: No such file or directory

root@cadaques /home/miquel/ # yaourt -Syu
bash: /usr/bin/yaourt: /bin/bash: bad interpreter: No such file or directory
root@cadaques /home/miquel/ # w
bash: /usr/bin/w: No such file or directory

Is there any solution? I'm afraid is not gonna be that easy to fix it.

Thanks in advance.

TigTex

Member

From: Portugal

Registered: 2008-06-19

Posts: 301

Re: Broken system after upgrading package-query

pacman -Qo 
/usr/bin/comm is owned by coreutils 8.5-2
/usr/bin/testdb is owned by pacman 3.4.0-2
/bin/awk is owned by gawk 3.1.8-1
/usr/bin/sort is owned by coreutils 8.5-2

Is everything ok with your mirror and your filesystem? You have multiple packages missing somehow.
And it looks like the problem was already here before you upgrade. glibc failed updating.

Last edited by TigTex (2010-06-25 19:10:44)

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.::. TigTex @ Portugal .::.

miguimon

Member

From: Sydney

Registered: 2008-02-28

Posts: 37

Website

Re: Broken system after upgrading package-query

Unfortunately I'm not able to run any command.. what can I do? I don't have physical access to the server.

wonder

Developer

From: Bucharest, Romania

Registered: 2006-07-05

Posts: 5,941

Website

Re: Broken system after upgrading package-query

stop using yaourt, merged your pacnew and use pacman from know own

hint. rebuild that crap

---

Give what you have. To someone, it may be better than you dare to think.

zertyz

Member

From: Rio de Janeiro

Registered: 2010-06-25

Posts: 14

Website

Re: Broken system after upgrading package-query

Hi,

I've a server (x86_64) and after updating the system with yaourt -Syu my server is totally unusable, very strange. Here is the output after the update:

I've seen similar behavior with a misconfigured mirroslist file where the wrong architecture was selected. In your case, are you sure you really run a x86_64 system?

If you can boot, try a "lscpu" and "uname -a" for they can tell you.

I'm afraid I have no better recomendation for you than to reinstall the machine.

[]'s

aqd

Member

Registered: 2010-03-04

Posts: 8

Re: Broken system after upgrading package-query

I got the same problem after pacman -Syu. Everything is broken -- I fixed it by manually installing glibc files, but it's broken again after pacman -S glibc in the running system.