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#1 2021-05-20 15:56:51

airv_zxf
Member
From: Guadalajara City, Mexico
Registered: 2017-08-19
Posts: 54
Website

[SOLVED] gcc10-libs: exists in filesystem (owned by gcc6-gcj)

Does someone have the same problem trying to update?

error: failed to commit transaction (conflicting files)
gcc10-libs: /usr/lib/gcc/x86_64-pc-linux-gnu/lib/libgcc_s.so exists in filesystem (owned by gcc6-gcj)
gcc10-libs: /usr/lib/gcc/x86_64-pc-linux-gnu/lib/libgcc_s.so.1 exists in filesystem (owned by gcc6-gcj)

Command for update:

sudo pacman -Syuu  --noconfirm
# or
sudo pacman -Syuu  --noconfirm --ignore gcc

Note: Maybe it has some little relation to the post [SOLVED] arrayfire FTBFS with gcc 11, some time some package did a big change which is affecting other packages or the system.

Error:

Packages (35) alembic-1.8.1-2  bbswitch-0.8-419  blender-17:2.92.0-7  cuda-11.3.0-2  dialog-1:1.3_20210509-1  egl-wayland-1.1.7-1
              freeimage-3.18.0-9  gcc10-1:10.2.0-3  gcc10-libs-1:10.2.0-3  gegl-0.4.30-3  gimp-2.10.24-4  gst-plugins-bad-1.18.4-7
              gst-plugins-bad-libs-1.18.4-7  haskell-cmark-gfm-0.2.2-65  imagemagick-7.0.11.13-2  imath-3.0.3-1  libvirt-1:7.3.0-1
              libvirt-python-1:7.3.0-1  linux-5.12.5.arch1-1  linux-headers-5.12.5.arch1-1  nodejs-16.2.0-1  nvidia-465.31-3
              openexr-3.0.3-1  openimageio-2.2.13.0-3  openscenegraph-3.6.5-5  openvdb-8.0.1-4  perl-http-message-6.32-1
              qt5-base-5.15.2+kde+r193-1  runc-1.0.0rc95-1  systemd-248.3-2  systemd-libs-248.3-2  systemd-sysvcompat-248.3-2
              valgrind-3.17.0-1  virtualbox-host-modules-arch-6.1.22-11  xfce4-screenshooter-1.9.9-1

Total Installed Size:  4788.95 MiB
Net Upgrade Size:       139.86 MiB

:: Proceed with installation? [Y/n]
(35/35) checking keys in keyring                                                   [###############################################] 100%
(35/35) checking package integrity                                                 [###############################################] 100%
(35/35) loading package files                                                      [###############################################] 100%
(35/35) checking for file conflicts                                                [###############################################] 100%
error: failed to commit transaction (conflicting files)
gcc10-libs: /usr/lib/gcc/x86_64-pc-linux-gnu/lib/libgcc_s.so exists in filesystem (owned by gcc6-gcj)
gcc10-libs: /usr/lib/gcc/x86_64-pc-linux-gnu/lib/libgcc_s.so.1 exists in filesystem (owned by gcc6-gcj)
Errors occurred, no packages were upgraded.

History of my `gcc` updates:

[2021-05-16T22:02:25-0500] [ALPM] upgraded lib32-gcc-libs (10.2.0-6 -> 11.1.0-1)
[2021-05-16T22:02:25-0500] [ALPM] upgraded gcc (10.2.0-6 -> 11.1.0-1)
[2021-05-16T22:02:24-0500] [ALPM] upgraded gcc-libs (10.2.0-6 -> 11.1.0-1)
[2021-02-06T04:02:33-0600] [ALPM] upgraded lib32-gcc-libs (10.2.0-4 -> 10.2.0-6)
[2021-02-06T04:02:33-0600] [ALPM] upgraded gcc-libs (10.2.0-4 -> 10.2.0-6)
[2021-02-06T04:02:33-0600] [ALPM] upgraded gcc (10.2.0-4 -> 10.2.0-6)
[2020-12-02T00:08:53-0600] [ALPM] upgraded lib32-gcc-libs (10.2.0-3 -> 10.2.0-4)
[2020-12-02T00:08:52-0600] [ALPM] upgraded gcc (10.2.0-3 -> 10.2.0-4)
[2020-12-02T00:08:50-0600] [ALPM] upgraded gcc-libs (10.2.0-3 -> 10.2.0-4)
[2020-10-01T14:18:02-0500] [ALPM] upgraded lib32-gcc-libs (10.2.0-2 -> 10.2.0-3)
[2020-10-01T14:18:02-0500] [ALPM] upgraded gcc (10.2.0-2 -> 10.2.0-3)
[2020-10-01T14:18:01-0500] [ALPM] upgraded gcc-libs (10.2.0-2 -> 10.2.0-3)
[2020-09-25T23:12:20-0500] [ALPM] upgraded lib32-gcc-libs (10.2.0-1 -> 10.2.0-2)
[2020-09-25T23:12:18-0500] [ALPM] upgraded gcc (10.2.0-1 -> 10.2.0-2)
[2020-09-25T23:12:01-0500] [ALPM] upgraded gcc-libs (10.2.0-1 -> 10.2.0-2)
[2020-08-23T15:30:10-0500] [ALPM] upgraded lib32-gcc-libs (10.1.0-2 -> 10.2.0-1)
[2020-08-23T15:30:09-0500] [ALPM] upgraded gcc (10.1.0-2 -> 10.2.0-1)
[2020-08-23T15:30:03-0500] [ALPM] upgraded gcc-libs (10.1.0-2 -> 10.2.0-1)
[2020-05-24T13:54:17-0500] [ALPM] upgraded lib32-gcc-libs (10.1.0-1 -> 10.1.0-2)
[2020-05-24T13:54:15-0500] [ALPM] upgraded gcc (10.1.0-1 -> 10.1.0-2)
[2020-05-24T13:54:14-0500] [ALPM] upgraded gcc-libs (10.1.0-1 -> 10.1.0-2)
[2020-05-21T13:39:21-0500] [ALPM] upgraded lib32-gcc-libs (9.3.0-1 -> 10.1.0-1)
[2020-05-21T13:39:19-0500] [ALPM] upgraded gcc (9.3.0-1 -> 10.1.0-1)
[2020-05-21T13:39:13-0500] [ALPM] upgraded gcc-libs (9.3.0-1 -> 10.1.0-1)
[2020-03-26T19:33:00-0600] [ALPM] upgraded lib32-gcc-libs (9.2.1+20200130-2 -> 9.3.0-1)
[2020-03-26T19:32:59-0600] [ALPM] upgraded gcc8 (8.3.0-4 -> 8.4.0-1)
[2020-03-26T19:32:58-0600] [ALPM] upgraded gcc (9.2.1+20200130-2 -> 9.3.0-1)
[2020-03-26T19:32:58-0600] [ALPM] upgraded gcc8-libs (8.3.0-4 -> 8.4.0-1)
[2020-03-26T19:32:55-0600] [ALPM] upgraded gcc-libs (9.2.1+20200130-2 -> 9.3.0-1)
[2020-02-29T01:46:22-0600] [ALPM] upgraded gcc6-gcj (6.5.0-3 -> 6.5.0-4)
[2020-02-29T01:46:21-0600] [ALPM] upgraded gcc6-fortran (6.5.0-3 -> 6.5.0-4)
[2020-02-29T01:46:20-0600] [ALPM] upgraded gcc6 (6.5.0-3 -> 6.5.0-4)
[2020-02-29T01:46:19-0600] [ALPM] upgraded gcc6-libs (6.5.0-3 -> 6.5.0-4)
[2020-02-24T22:26:44-0600] [ALPM] upgraded gcc7-fortran (7.5.0-1 -> 7.5.0-2)
[2020-02-24T22:26:44-0600] [ALPM] upgraded gcc7 (7.5.0-1 -> 7.5.0-2)
[2020-02-24T22:26:42-0600] [ALPM] upgraded gcc7-libs (7.5.0-1 -> 7.5.0-2)
[2020-02-13T19:27:43-0600] [ALPM] upgraded lib32-gcc-libs (9.2.0-4 -> 9.2.1+20200130-2)
[2020-02-13T19:27:41-0600] [ALPM] upgraded gcc (9.2.0-4 -> 9.2.1+20200130-2)
[2020-02-13T19:27:31-0600] [ALPM] upgraded gcc-libs (9.2.0-4 -> 9.2.1+20200130-2)
[2019-11-22T11:18:54-0600] [ALPM] upgraded gcc7-fortran (7.4.1+20181207-5 -> 7.5.0-1)
[2019-11-22T11:18:53-0600] [ALPM] upgraded gcc7 (7.4.1+20181207-5 -> 7.5.0-1)
[2019-11-22T11:18:51-0600] [ALPM] upgraded gcc7-libs (7.4.1+20181207-5 -> 7.5.0-1)
[2019-11-22T09:59:25-0600] [ALPM] upgraded gcc8 (8.3.0-3 -> 8.3.0-4)
[2019-11-22T09:59:23-0600] [ALPM] upgraded gcc8-libs (8.3.0-3 -> 8.3.0-4)
[2019-11-06T06:01:36-0600] [ALPM] upgraded lib32-gcc-libs (9.2.0-3 -> 9.2.0-4)
[2019-11-06T06:01:34-0600] [ALPM] upgraded gcc (9.2.0-3 -> 9.2.0-4)
[2019-11-06T06:01:32-0600] [ALPM] upgraded gcc-libs (9.2.0-3 -> 9.2.0-4)
[2019-10-29T20:08:54-0600] [ALPM] upgraded lib32-gcc-libs (9.2.0-2 -> 9.2.0-3)
[2019-10-29T20:08:52-0600] [ALPM] upgraded gcc (9.2.0-2 -> 9.2.0-3)
[2019-10-29T20:07:13-0600] [ALPM] upgraded gcc-libs (9.2.0-2 -> 9.2.0-3)
[2019-10-10 23:05] [ALPM] upgraded gcc7-libs (7.4.1+20181207-3 -> 7.4.1+20181207-5)
[2019-10-10 23:05] [ALPM] upgraded gcc7 (7.4.1+20181207-3 -> 7.4.1+20181207-5)
[2019-10-10 20:42] [ALPM] upgraded gcc6-libs (6.4.1-5 -> 6.5.0-3)
[2019-10-10 20:42] [ALPM] upgraded gcc6 (6.4.1-5 -> 6.5.0-3)
[2019-10-06 06:02] [ALPM] upgraded lib32-gcc-libs (9.1.0-2 -> 9.2.0-2)
[2019-10-06 06:01] [ALPM] upgraded gcc-libs (9.1.0-2 -> 9.2.0-2)
[2019-10-06 06:01] [ALPM] upgraded gcc (9.1.0-2 -> 9.2.0-2)
[2019-09-28 15:46] [ALPM] upgraded gcc8-libs (8.3.0-2 -> 8.3.0-3)
[2019-09-28 15:46] [ALPM] upgraded gcc8 (8.3.0-2 -> 8.3.0-3)
[2019-06-28 19:40] [ALPM] upgraded lib32-gcc-libs (9.1.0-1 -> 9.1.0-2)
[2019-06-28 19:40] [ALPM] upgraded gcc (9.1.0-1 -> 9.1.0-2)
[2019-06-28 19:38] [ALPM] upgraded gcc-libs (9.1.0-1 -> 9.1.0-2)
[2019-06-18 20:05] [ALPM] upgraded lib32-gcc-libs (8.3.0-1 -> 9.1.0-1)
[2019-06-18 20:03] [ALPM] upgraded gcc-libs (8.3.0-1 -> 9.1.0-1)
[2019-06-18 20:03] [ALPM] upgraded gcc (8.3.0-1 -> 9.1.0-1)
[2019-04-22 22:02] [ALPM] upgraded lib32-gcc-libs (8.2.1+20181127-1 -> 8.3.0-1)
[2019-04-22 22:02] [ALPM] upgraded gcc-libs (8.2.1+20181127-1 -> 8.3.0-1)
[2019-04-22 22:02] [ALPM] upgraded gcc (8.2.1+20181127-1 -> 8.3.0-1)
[2019-03-29 20:45] [ALPM] upgraded gcc7-libs (7.4.1+20181207-2 -> 7.4.1+20181207-3)
[2019-03-29 20:45] [ALPM] upgraded gcc7 (7.4.1+20181207-2 -> 7.4.1+20181207-3)
[2019-01-06 22:19] [ALPM] upgraded lib32-gcc-libs (8.2.1+20180831-1 -> 8.2.1+20181127-1)
[2019-01-06 22:19] [ALPM] upgraded gcc-libs (8.2.1+20180831-1 -> 8.2.1+20181127-1)
[2019-01-06 22:19] [ALPM] upgraded gcc (8.2.1+20180831-1 -> 8.2.1+20181127-1)
[2019-01-06 22:19] [ALPM] upgraded gcc7-libs (7.3.1+20180814-1 -> 7.4.1+20181207-2)
[2019-01-06 22:19] [ALPM] upgraded gcc7 (7.3.1+20180814-1 -> 7.4.1+20181207-2)
[2018-09-03 21:33] [ALPM] upgraded lib32-gcc-libs (8.2.0-2 -> 8.2.1+20180831-1)
[2018-09-03 21:33] [ALPM] upgraded gcc-libs (8.2.0-2 -> 8.2.1+20180831-1)
[2018-09-03 21:33] [ALPM] upgraded gcc (8.2.0-2 -> 8.2.1+20180831-1)
[2018-08-17 19:27] [ALPM] upgraded gcc7-libs (7.3.1+20180406-2 -> 7.3.1+20180814-1)
[2018-08-17 19:27] [ALPM] upgraded gcc7 (7.3.1+20180406-2 -> 7.3.1+20180814-1)
[2018-08-10 22:28] [ALPM] upgraded lib32-gcc-libs (8.1.1+20180531-1 -> 8.2.0-2)
[2018-08-10 22:28] [ALPM] upgraded gcc (8.1.1+20180531-1 -> 8.2.0-2)
[2018-08-10 22:27] [ALPM] upgraded gcc-libs (8.1.1+20180531-1 -> 8.2.0-2)
[2018-06-21 21:17] [ALPM] upgraded lib32-gcc-libs (8.1.0-1 -> 8.1.1+20180531-1)
[2018-06-21 21:17] [ALPM] upgraded gcc (8.1.0-1 -> 8.1.1+20180531-1)
[2018-06-21 21:16] [ALPM] upgraded gcc-libs (8.1.0-1 -> 8.1.1+20180531-1)
[2018-05-14 22:12] [ALPM] upgraded lib32-gcc-libs (7.3.1+20180406-1 -> 8.1.0-1)
[2018-05-14 22:12] [ALPM] upgraded gcc (7.3.1+20180406-1 -> 8.1.0-1)
[2018-05-14 22:11] [ALPM] upgraded gcc-libs (7.3.1+20180406-1 -> 8.1.0-1)
[2018-04-25 21:04] [ALPM] upgraded lib32-gcc-libs (7.3.1+20180312-2 -> 7.3.1+20180406-1)
[2018-04-25 21:04] [ALPM] upgraded gcc-libs (7.3.1+20180312-2 -> 7.3.1+20180406-1)
[2018-04-25 21:04] [ALPM] upgraded gcc (7.3.1+20180312-2 -> 7.3.1+20180406-1)

Last edited by airv_zxf (2021-05-20 21:50:44)

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#2 2021-05-20 15:59:19

Scimmia
Fellow
Registered: 2012-09-01
Posts: 13,729

Re: [SOLVED] gcc10-libs: exists in filesystem (owned by gcc6-gcj)

So you have an AUR package of an ancient compiler that's conflicting. I doubt anyone else is having the problem, because very, very few, if any, people would still have that installed.

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#3 2021-05-20 21:50:03

airv_zxf
Member
From: Guadalajara City, Mexico
Registered: 2017-08-19
Posts: 54
Website

Re: [SOLVED] gcc10-libs: exists in filesystem (owned by gcc6-gcj)

To solve it, I removed this ancient package with:

sudo pacman -Rncs gcc6

That's right. I don't remember what package I installed from AUR which required the `gcc6`, should be `gcc6-fortran` or  `gcc6-gcj`. Below I put the output of the dependencies.

Running `pactree -r gcc6`

gcc6
├─gcc6-fortran
└─gcc6-gcj

Running `pactree gcc6`

gcc6
├─gcc6-libs provides gcc6-libs=6.5.0-4
│ └─glibc provides glibc>=2.25
│   ├─linux-api-headers provides linux-api-headers>=4.10
│   ├─tzdata
│   └─filesystem
│     └─iana-etc
├─binutils provides binutils>=2.28
│ ├─glibc
│ ├─zlib
│ │ └─glibc
│ └─elfutils
│   ├─gcc-libs
│   │ └─glibc provides glibc>=2.27
│   ├─glibc
│   ├─libarchive provides libarchive.so=13-64
│   │ ├─acl
│   │ │ ├─attr
│   │ │ │ └─glibc
│   │ │ └─attr provides libattr.so
│   │ ├─acl provides libacl.so=1-64
│   │ ├─bzip2
│   │ │ ├─glibc
│   │ │ └─bash provides sh
│   │ │   ├─readline
│   │ │   │ ├─glibc
│   │ │   │ ├─ncurses
│   │ │   │ │ ├─glibc
│   │ │   │ │ └─gcc-libs
│   │ │   │ └─ncurses provides libncursesw.so=6-64
│   │ │   ├─readline provides libreadline.so=8-64
│   │ │   ├─glibc
│   │ │   └─ncurses
│   │ ├─expat
│   │ │ └─glibc
│   │ ├─lz4
│   │ │ └─glibc
│   │ ├─openssl
│   │ │ └─glibc
│   │ ├─xz
│   │ │ └─bash provides sh
│   │ ├─zlib
│   │ └─zstd
│   │   ├─glibc
│   │   ├─gcc-libs
│   │   ├─zlib
│   │   ├─xz
│   │   └─lz4
│   ├─libelf provides libelf=0.184-1
│   │ ├─gcc-libs
│   │ ├─bzip2 provides libbz2.so=1.0-64
│   │ ├─curl provides libcurl.so=4-64
│   │ │ ├─ca-certificates
│   │ │ │ └─ca-certificates-mozilla
│   │ │ │   └─ca-certificates-utils provides ca-certificates-utils>=20181109-3
│   │ │ │     ├─bash
│   │ │ │     ├─coreutils
│   │ │ │     │ ├─glibc
│   │ │ │     │ ├─acl
│   │ │ │     │ ├─attr
│   │ │ │     │ ├─gmp
│   │ │ │     │ │ ├─gcc-libs
│   │ │ │     │ │ └─bash provides sh
│   │ │ │     │ ├─libcap
│   │ │ │     │ │ ├─glibc
│   │ │ │     │ │ └─pam
│   │ │ │     │ │   ├─glibc
│   │ │ │     │ │   ├─libtirpc
│   │ │ │     │ │   │ └─krb5
│   │ │ │     │ │   │   ├─glibc
│   │ │ │     │ │   │   ├─e2fsprogs
│   │ │ │     │ │   │   │ ├─bash provides sh
│   │ │ │     │ │   │   │ └─util-linux-libs
│   │ │ │     │ │   │   ├─e2fsprogs provides libss.so=2-64
│   │ │ │     │ │   │   ├─e2fsprogs provides libcom_err.so=2-64
│   │ │ │     │ │   │   ├─libldap
│   │ │ │     │ │   │   │ ├─libsasl
│   │ │ │     │ │   │   │ │ └─openssl
│   │ │ │     │ │   │   │ └─e2fsprogs
│   │ │ │     │ │   │   └─keyutils
│   │ │ │     │ │   │     ├─glibc
│   │ │ │     │ │   │     └─bash provides sh
│   │ │ │     │ │   ├─pambase
│   │ │ │     │ │   ├─audit
│   │ │ │     │ │   │ ├─glibc
│   │ │ │     │ │   │ ├─krb5
│   │ │ │     │ │   │ └─libcap-ng
│   │ │ │     │ │   │   └─glibc
│   │ │ │     │ │   ├─audit provides libaudit.so=1-64
│   │ │ │     │ │   ├─libxcrypt
│   │ │ │     │ │   │ └─glibc
│   │ │ │     │ │   └─libxcrypt provides libcrypt.so=2-64
│   │ │ │     │ └─openssl
│   │ │ │     ├─findutils
│   │ │ │     │ ├─glibc
│   │ │ │     │ └─bash provides sh
│   │ │ │     └─p11-kit provides p11-kit>=0.23.19
│   │ │ │       ├─libp11-kit provides libp11-kit=0.23.22-1
│   │ │ │       │ ├─glibc
│   │ │ │       │ ├─libtasn1
│   │ │ │       │ │ └─glibc
│   │ │ │       │ └─libffi
│   │ │ │       │   └─glibc
│   │ │ │       ├─coreutils
│   │ │ │       ├─libp11-kit provides libp11-kit.so=0-64
│   │ │ │       └─systemd-libs provides libsystemd.so=0-64
│   │ │ │         ├─glibc
│   │ │ │         ├─libcap
│   │ │ │         ├─libgcrypt
│   │ │ │         │ └─libgpg-error
│   │ │ │         │   ├─glibc
│   │ │ │         │   └─bash provides sh
│   │ │ │         ├─libp11-kit
│   │ │ │         ├─lz4
│   │ │ │         ├─xz
│   │ │ │         └─zstd
│   │ │ ├─krb5
│   │ │ ├─libssh2
│   │ │ │ ├─openssl
│   │ │ │ └─zlib
│   │ │ ├─libssh2 provides libssh2.so=1-64
│   │ │ ├─openssl
│   │ │ ├─zlib
│   │ │ ├─libpsl
│   │ │ │ ├─libidn2
│   │ │ │ │ └─libunistring
│   │ │ │ │   └─glibc
│   │ │ │ ├─libidn2 provides libidn2.so=0-64
│   │ │ │ └─libunistring
│   │ │ ├─libpsl provides libpsl.so=5-64
│   │ │ ├─libnghttp2
│   │ │ │ └─glibc
│   │ │ ├─libidn2
│   │ │ ├─libidn2 provides libidn2.so=0-64
│   │ │ └─zstd
│   │ ├─xz
│   │ ├─zlib
│   │ └─zstd
│   ├─libmicrohttpd provides libmicrohttpd.so=12-64
│   │ └─gnutls
│   │   ├─gcc-libs
│   │   ├─libtasn1
│   │   ├─readline
│   │   ├─zlib
│   │   ├─nettle
│   │   │ └─gmp
│   │   ├─p11-kit
│   │   ├─libidn2
│   │   ├─libidn2 provides libidn2.so=0-64
│   │   └─libunistring
│   └─sqlite
│     ├─readline
│     └─zlib
└─libmpc
  └─mpfr
    ├─glibc
    └─gmp

Last edited by airv_zxf (2024-05-13 14:37:57)

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