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#1 2022-07-15 01:31:08

shoelesshunter
Member
From: USA
Registered: 2014-05-18
Posts: 289

[solved]pacman does not recognize installed application. can't upgrade

I am using Calibre ebook library manager. When I encountered a bug, I tried to update the package with pacman. Even though I am using it at this moment, pacman does not list it as installed. I do

 pacman -Syu calibre 

and the installation/upgrade of the packages and dependencies fails because they are found to already exist in the filesystem.

Is manually deleting the listed files then installing Calibre again the right method? Or can I tell pacman this package is already installed and just update it somehow?

Thanks

Last edited by shoelesshunter (2022-07-15 02:11:42)

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#2 2022-07-15 01:35:04

jasonwryan
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From: .nz
Registered: 2009-05-09
Posts: 30,426
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Re: [solved]pacman does not recognize installed application. can't upgrade

The full output from pacman is always more helpful than paraphrasing.


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#3 2022-07-15 01:37:14

shoelesshunter
Member
From: USA
Registered: 2014-05-18
Posts: 289

Re: [solved]pacman does not recognize installed application. can't upgrade

sudo pacman -Syu calibre
:: Synchronizing package databases...
 core is up to date
 extra                           1720.5 KiB  2.15 MiB/s 00:01 [#################################] 100%
 community                          6.7 MiB  1208 KiB/s 00:06 [#################################] 100%
 multilib is up to date
:: Starting full system upgrade...
resolving dependencies...
looking for conflicting packages...

Package (32)                      Old Version  New Version      Net Change  Download Size

extra/chmlib                                   0.40-6             0.16 MiB
extra/gtk-vnc                     1.3.0-1      1.3.1-1            0.00 MiB       0.15 MiB
community/jxrlib                               0.2.4-1            0.68 MiB
extra/libnotify                   0.7.12-1     0.8.0-1            0.03 MiB       0.06 MiB
extra/libunrar                                 1:6.1.7-1          0.30 MiB
community/mathjax                              3.2.2-1           23.02 MiB
community/optipng                              0.7.7-2            0.10 MiB
community/podofo                               0.9.8-1            4.41 MiB
core/python-brotli                             1.0.9-8            0.74 MiB
community/python-brotlicffi                    1.0.9.2-3          0.10 MiB
community/python-cchardet                      2.1.7-4            0.27 MiB
community/python-css-parser                    1.0.7-1            1.74 MiB
extra/python-cssselect                         1.1.0-9            0.14 MiB
community/python-dnspython                     1:2.2.1-1          1.95 MiB
extra/python-feedparser                        6.0.3-1            0.56 MiB
community/python-html5-parser                  0.4.10-3           0.49 MiB
community/python-inflate64                     0.1.3-1            0.08 MiB
community/python-mechanize                     1:0.4.8-1          1.07 MiB
community/python-multivolumefile               0.2.3-3            0.04 MiB
community/python-py7zr                         0.19.0-1           0.52 MiB
community/python-pybcj                         0.6.1-1            0.08 MiB
community/python-pychm                         0.8.6-6            0.08 MiB
community/python-pyppmd                        0.18.2-1           0.09 MiB
extra/python-pyqt5-webengine                   5.15.6-1           0.60 MiB
community/python-pyzstd                        0.15.2-1           0.79 MiB
community/python-regex                         2022.6.2-1         1.69 MiB
extra/python-sgmllib3k                         1.0.0-4            0.04 MiB
community/python-texttable                     1.6.4-3            0.07 MiB
community/python-unrardll                      0.1.5-1            0.05 MiB
community/python-zeroconf                      0.38.7-1           0.67 MiB
extra/qt5-imageformats                         5.15.5+kde+r4-1    0.20 MiB
community/calibre                              5.44.0-1          90.19 MiB

Total Download Size:     0.21 MiB
Total Installed Size:  132.14 MiB
Net Upgrade Size:      130.97 MiB

:: Proceed with installation? [Y/n]
:: Retrieving packages...
 gtk-vnc-1.3.1-1-x86_64           155.1 KiB  1108 KiB/s 00:00 [#################################] 100%
 libnotify-0.8.0-1-x86_64          58.4 KiB   730 KiB/s 00:00 [#################################] 100%
 Total (2/2)                      213.5 KiB   712 KiB/s 00:00 [#################################] 100%
(32/32) checking keys in keyring                              [#################################] 100%
(32/32) checking package integrity                            [#################################] 100%
(32/32) loading package files                                 [#################################] 100%
(32/32) checking for file conflicts                           [#################################] 100%
error: failed to commit transaction (conflicting files)
calibre: /usr/bin/calibre exists in filesystem
calibre: /usr/bin/calibre-customize exists in filesystem
calibre: /usr/bin/calibre-debug exists in filesystem
calibre: /usr/bin/calibre-parallel exists in filesystem
calibre: /usr/bin/calibre-server exists in filesystem
calibre: /usr/bin/calibre-smtp exists in filesystem
calibre: /usr/bin/calibredb exists in filesystem
calibre: /usr/bin/ebook-convert exists in filesystem
calibre: /usr/bin/ebook-device exists in filesystem
calibre: /usr/bin/ebook-edit exists in filesystem
calibre: /usr/bin/ebook-meta exists in filesystem
calibre: /usr/bin/ebook-polish exists in filesystem
calibre: /usr/bin/ebook-viewer exists in filesystem
calibre: /usr/bin/fetch-ebook-metadata exists in filesystem
calibre: /usr/bin/lrf2lrs exists in filesystem
calibre: /usr/bin/lrfviewer exists in filesystem
calibre: /usr/bin/lrs2lrf exists in filesystem
calibre: /usr/bin/markdown-calibre exists in filesystem
calibre: /usr/bin/web2disk exists in filesystem
calibre: /usr/share/bash-completion/completions/calibre exists in filesystem
calibre: /usr/share/bash-completion/completions/calibre-debug exists in filesystem
calibre: /usr/share/bash-completion/completions/calibre-server exists in filesystem
calibre: /usr/share/bash-completion/completions/calibre-smtp exists in filesystem
calibre: /usr/share/bash-completion/completions/ebook-convert exists in filesystem
calibre: /usr/share/bash-completion/completions/ebook-device exists in filesystem
calibre: /usr/share/bash-completion/completions/ebook-edit exists in filesystem
calibre: /usr/share/bash-completion/completions/ebook-meta exists in filesystem
calibre: /usr/share/bash-completion/completions/ebook-polish exists in filesystem
calibre: /usr/share/bash-completion/completions/ebook-viewer exists in filesystem
calibre: /usr/share/bash-completion/completions/fetch-ebook-metadata exists in filesystem
calibre: /usr/share/bash-completion/completions/lrf2lrs exists in filesystem
calibre: /usr/share/bash-completion/completions/lrfviewer exists in filesystem
calibre: /usr/share/metainfo/calibre-ebook-edit.metainfo.xml exists in filesystem
calibre: /usr/share/metainfo/calibre-ebook-viewer.metainfo.xml exists in filesystem
calibre: /usr/share/metainfo/calibre-gui.metainfo.xml exists in filesystem
calibre: /usr/share/zsh/site-functions/_calibre exists in filesystem
Errors occurred, no packages were upgraded. 

edit: just realized the Calibre I was using was one I installed to /opt using the zip from the site. I removed it. But still can't re-do with pacman.

Last edited by shoelesshunter (2022-07-15 01:41:57)

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#4 2022-07-15 01:59:01

jasonwryan
Anarchist
From: .nz
Registered: 2009-05-09
Posts: 30,426
Website

Re: [solved]pacman does not recognize installed application. can't upgrade

shoelesshunter wrote:

just realized the Calibre I was using was one I installed to /opt using the zip from the site. I removed it. But still can't re-do with pacman.

That would explain it.

pacman wiki wrote:

If you had installed a program manually without using pacman, for example through make install, you have to remove/uninstall this program with all of its files.


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#5 2022-07-15 02:11:02

shoelesshunter
Member
From: USA
Registered: 2014-05-18
Posts: 289

Re: [solved]pacman does not recognize installed application. can't upgrade

sorry. I didn't realize that's how it was installed before I made the post. it turns out when I did that, the script made symlinks from /opt to those files listed. I manually removed the symlinks, and reinstalled with pacman. thanks.

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